Hi Matt, I loaded the file as an overlay with the various .surf.gii files in the folder "100206_3T_Structural_preproc\100206\MNINonLinear\fsaverage_LR32k". When I step through the 15 images corresponding to the 15 parcellation dimensions, I see very sparse visualizations. For example, this is the visualization I got corresponding to one of the parcellation dimensions: [image: image.png] I'm not sure if I'm using the wrong surface files, or if I need to re-save the .dtseries.nii file (to have 1s and 0s rather than the regression coeffecients), or if there is something else I need to change or add.
Best, Cathy Am Mi., 10. Okt. 2018 um 04:14 Uhr schrieb Glasser, Matthew < glass...@wustl.edu>: > Steve and I think you have the right file, but are not understanding what > is confusing about viewing that file in Connectome Workbench, assuming you > have loaded the appropriate surfaces and volumes. > > Matt. > > From: <hcp-users-boun...@humanconnectome.org> on behalf of Cathy Chen < > c...@alumni.princeton.edu> > Date: Tuesday, October 9, 2018 at 9:11 AM > To: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> > Subject: [HCP-Users] Visualizing Greyordinate Masks > > Dear HCP experts, > > I'm working with subject-specific parcellations (for instance, " > HCP_S1200_PTNmaps_d15_25_50_100\3T_HCP1200_MSMAll_d15_ts2_Z\100206.dtseries.nii" > ) and would like to visualize the greyordinates corresponding to each of > the 15 (or 25, 50, or 100) spatial maps. > > I've been using Connectome Workbench, but have not been able to figure out > a way to do this based on online tutorials -- is it possible to visualize > these maps with Connectome Workbench? Would I need to save new versions of > the data, so that the maps lie in a [num_grayordinates x num_maps] matrix > rather than a [num_maps x num_grayordinates] matrix? > > Best, > Cathy > > _______________________________________________ > HCP-Users mailing list > HCP-Users@humanconnectome.org > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > > > ------------------------------ > > The materials in this message are private and may contain Protected > Healthcare Information or other information of a sensitive nature. If you > are not the intended recipient, be advised that any unauthorized use, > disclosure, copying or the taking of any action in reliance on the contents > of this information is strictly prohibited. If you have received this email > in error, please immediately notify the sender via telephone or return mail. > _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
