Thanks for your response. Do you mean running this?: fslroi 
NTTMS_s037_181015_3T_SpinEchoFieldMap_AP_1.nii.gz test.nii.gz -16 96 -16 96 66 
66

If that is the case the test file seams to be empty.

Leah.



> On Mar 24, 2019, at 8:25 PM, Glasser, Matthew <glass...@wustl.edu> wrote:
> 
> Subtract 128 from 96 and then take half of that as your start and 96 as your 
> length.
> 
> Matt.
> 
> From: <hcp-users-boun...@humanconnectome.org 
> <mailto:hcp-users-boun...@humanconnectome.org>> on behalf of Marta Moreno 
> <mmorenoort...@icloud.com <mailto:mmorenoort...@icloud.com>>
> Date: Sunday, March 24, 2019 at 6:40 PM
> To: HCP Users <hcp-users@humanconnectome.org 
> <mailto:hcp-users@humanconnectome.org>>
> Subject: [HCP-Users] Topup_AP dimension issue
> 
> Dear Experts,
> 
> Maybe a trivial question but how can I change the Topup_AP dimension' size 
> from 128 128 66 to 96 96 66? Using fslroi I am cutting the brain. 
> 
> Thanks,
> 
> Leah.
> 
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