Dear HCP community I am trying to create a labeled volume that will work with -cifti-create-dense-from-template
The volume data has over 100 ROI's and the cifti create function only imports specified labels CORTEX_LEFT CORTEX_RIGHT CEREBELLUM ACCUMBENS_LEFT ACCUMBENS_RIGHT ALL_GREY_MATTER ALL_WHITE_MATTER AMYGDALA_LEFT AMYGDALA_RIGHT BRAIN_STEM CAUDATE_LEFT CAUDATE_RIGHT CEREBELLAR_WHITE_MATTER_LEFT CEREBELLAR_WHITE_MATTER_RIGHT CEREBELLUM_LEFT CEREBELLUM_RIGHT CEREBRAL_WHITE_MATTER_LEFT CEREBRAL_WHITE_MATTER_RIGHT CORTEX DIENCEPHALON_VENTRAL_LEFT DIENCEPHALON_VENTRAL_RIGHT HIPPOCAMPUS_LEFT HIPPOCAMPUS_RIGHT INVALID OTHER OTHER_GREY_MATTER OTHER_WHITE_MATTER PALLIDUM_LEFT PALLIDUM_RIGHT PUTAMEN_LEFT PUTAMEN_RIGHT THALAMUS_LEFT THALAMUS_RIGHT I need to import all of the labeled ROI's values from the nii into the subortical cifti. I tried labeling all of the ROI's with OTHER and name collision in the input names did not allow that to work. Does anyone know how to solve this or a work around Thanks so much J _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
