(i) You can use wb_command -cifti-label-export-table on the dlabel file to get the order of the parcels in a fixed format, though there are extra lines and numbers in the output text file. 360 parcels is a rather long table, you might consider a matrix figure instead, and only mention the highlights. If you make the figure in wb_view, then you can upload the scene to BALSA, which will include the data files used to make it, allowing others to use your data directly instead of looking through a table.
Someone else will need to answer (ii). Tim On Thu, Jun 20, 2019 at 10:32 PM Marta Moreno <mmorenoort...@icloud.com> wrote: > Dear experts, > > After running: > > 1. PreFreeSurfer > 2. FreeSurfer > 3. PostFreeSurfer > 4. fMRIVolume > 5. fMRISurface > 6. ICA+FIX (MR+FIX) > 7. MSMAll (Do MSM Surface Registration) > 8. dedrift and resample pipeline > > 2 questions: > > (i) I used wb_command -cifti-parcellate and wb_command -cifti-correlation > to create a parcellation.pconn.nii file per each subject. I have uploaded > all files into matlab and now would like to create a table that includes > all subjects’ correlation value from parcel 264 to all 360 parcels, and > include the variable names for all 360 parcels. How can I do this? > > (ii) Is the file “RS_fMRI_MR_Atlas_MSMAll_Test_hp0_clean.dtseries.nii” > the final step after (8) to use for wb_command -cifti-parcellate and > wb_command > -cifti-correlation > > Thanks, > > L. > > > > _______________________________________________ > HCP-Users mailing list > HCP-Users@humanconnectome.org > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
