Summary looks good. Could you please try to compile your program with the h5pfc script that should be the "bin" directory of the HDF5 installation directory?
Elena ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Elena Pourmal The HDF Group http://hdfgroup.org 1800 So. Oak St., Suite 203, Champaign IL 61820 217.531.6112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ On Feb 15, 2013, at 4:36 AM, Annop Wongwathanarat wrote: > Hi Elena, > > I'm not the one who built the library. It's the version 1.8.9. > Here is the content in libhdf5.settings > > SUMMARY OF THE HDF5 CONFIGURATION > ================================= > > General Information: > ------------------- > HDF5 Version: 1.8.9 > Configured on: Fri Nov 16 13:49:47 CET 2012 > Configured by: wwn@hydra02 > Configure mode: production > Host system: x86_64-unknown-linux-gnu > Uname information: Linux hydra02 3.0.42-0.7-default #1 SMP Tue > Oct 9 11:58:45 > UTC 2012 (a8dc443) x86_64 x86_64 x86_64 GNU/Linux > Byte sex: little-endian > Libraries: > Installation point: > /u/system/SLES11/soft/hdf5/1.8.9/intel12.1/pe1209 > > Compiling Options: > ------------------ > Compilation Mode: production > C Compiler: /opt/ibmhpc/pe1209/ppe.poe/bin/mpiicc ( > Intel(R) C Intel(R) > 64 Compiler Version 12.1 Build 20120928) > CFLAGS: -fPIC > H5_CFLAGS: -std=c99 -O3 > AM_CFLAGS: > CPPFLAGS: > H5_CPPFLAGS: -D_POSIX_C_SOURCE=199506L -DNDEBUG > -UH5_DEBUG_API > AM_CPPFLAGS: -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE > -D_BSD_SOURCE > Shared C Library: yes > Static C Library: yes > Statically Linked Executables: no > LDFLAGS: > H5_LDFLAGS: > AM_LDFLAGS: > Extra libraries: -lz -lm > Archiver: ar > Ranlib: ranlib > Debugged Packages: > API Tracing: no > > Languages: > ---------- > Fortran: yes > Fortran Compiler: /opt/ibmhpc/pe1209/ppe.poe/bin/mpiifort ( > Intel(R) Fortran > Intel(R) 64 Compiler Version 12.1 Build 20120928) > Fortran 2003 Compiler: yes > Fortran Flags: -fPIC > H5 Fortran Flags: -O3 > AM Fortran Flags: > Shared Fortran Library: yes > Static Fortran Library: yes > > C++: no > > Features: > --------- > Parallel HDF5: yes > High Level library: yes > Threadsafety: no > Default API Mapping: v18 > With Deprecated Public Symbols: yes > I/O filters (external): deflate(zlib) > I/O filters (internal): shuffle,fletcher32,nbit,scaleoffset > MPE: > Direct VFD: no > dmalloc: no > Clear file buffers before write: yes > Using memory checker: no > Function Stack Tracing: no > GPFS: no > Strict File Format Checks: no > Optimization Instrumentation: no > Large File Support (LFS): yes > > I'm using the same fortran compiler as the one used for building the > library. > > The code runs without problem on my personal laptop with HDF5 1.8.8 > built with GNU fortran compiler. > > Thanks. > > Annop > >> Hi Annop, >> >> Is Fortran enabled too? Which version of HDF5 are you using? Did you build >> the HDF5 library? It will be very helpful if you show the content of the >> libhdf5.settings file. If Fortran is enabled, but Fortran compiler version >> is different, it may cause the problems too. >> >> Elena >> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ >> Elena Pourmal The HDF Group http://hdfgroup.org >> 1800 So. Oak St., Suite 203, Champaign IL 61820 >> 217.531.6112 >> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > > -- > ========================================== > | Annop Wongwathanarat | > | Max-Planck-Institut für Astrophysik | > | Karl-Schwarzschild-Str. 1 | > | 85741 Garching, Germany | > | Tel: +49-89-30000-2206 | > | Fax: +49-89-30000-2235 | > | E-mail: [email protected] | > ========================================== > > _______________________________________________ > Hdf-forum is for HDF software users discussion. > [email protected] > http://mail.hdfgroup.org/mailman/listinfo/hdf-forum_hdfgroup.org
_______________________________________________ Hdf-forum is for HDF software users discussion. [email protected] http://mail.hdfgroup.org/mailman/listinfo/hdf-forum_hdfgroup.org
