Rob, There shouldn't be size limit for h5repack. Unfortunately it is hard to say what could be wrong without information about the objects in the file. Could you please describe your data and its characteristics (dataset sizes, for example)?
You may try to specify chunk size using -l option and see what will happen. Elena ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Elena Pourmal The HDF Group http://hdfgroup.org 1800 So. Oak St., Suite 203, Champaign IL 61820 217.531.6112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ On Jun 5, 2013, at 2:49 PM, Robert Seigel wrote: > Hello, > > Is there a file size limit for h5repack? I am trying to repack 62Gb files > using the command: h5repack -f SHUF -f GZIP=6 <file1> <file2>. I have tried a > GZIP of 1 and it still does not work. The Linux operating system (or h5repack > - not sure) is killing the process before finishing. I have been using > h5repack on smaller files successfully. > > Is this a memory issue? The machine I am working on generally has about 40-90 > Gb free at any time. > > Thanks, > Rob > > > > > _______________________________________________ > Hdf-forum is for HDF software users discussion. > [email protected] > http://lists.hdfgroup.org/mailman/listinfo/hdf-forum_lists.hdfgroup.org
_______________________________________________ Hdf-forum is for HDF software users discussion. [email protected] http://lists.hdfgroup.org/mailman/listinfo/hdf-forum_lists.hdfgroup.org
