I recently deleted my libhdf5 files from the lib/ folder and reinstalled hdf5 (a newer version). Now when I run a python application, it crashes. I checked my lib/ folder, it only contains libhdf5.so.8 file.

Traceback (most recent call last):
  File "NSfracStep.py", line 154, in <module>
    from common import *
File "/uio/hume/student-u29/imranal/Work/Oasis/common/__init__.py", line 1, in <module>
    from io import *
File "/uio/hume/student-u29/imranal/Work/Oasis/common/io.py", line 8, in <module> from dolfin import MPI, Function, XDMFFile, HDF5File, info_red, VectorFunctionSpace File "/uio/hume/student-u29/imranal/Work/FEniCS/lib/python2.7/site-packages/dolfin/__init__.py", line 16, in <module>
    import cpp
File "/uio/hume/student-u29/imranal/Work/FEniCS/lib/python2.7/site-packages/dolfin/cpp/__init__.py", line 42, in <module>
    exec("import %s" % module_name)
  File "<string>", line 1, in <module>
File "/uio/hume/student-u29/imranal/Work/FEniCS/lib/python2.7/site-packages/dolfin/cpp/common.py", line 28, in <module>
    _common = swig_import_helper()
File "/uio/hume/student-u29/imranal/Work/FEniCS/lib/python2.7/site-packages/dolfin/cpp/common.py", line 24, in swig_import_helper
    _mod = imp.load_module('_common', fp, pathname, description)
ImportError: libhdf5.so.7: cannot open shared object file: No such file or directory

Imran

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