Hi,
I am a bit puzzled by an error that the h5ls utility is spitting out when
dumping the contents of files created with PyTables. For example:
$ h5ls -v ~/Downloads/test-pytables.h5/mydata
Opened "/Users/faltet/Downloads/test-pytables.h5" with sec2 driver.
mydata Dataset {10/10}
Attribute: CLASS scalar
Type: 5-byte null-terminated UTF-8 string
Data: "ARRAY"
Attribute: FLAVOR scalar
Type: 5-byte null-terminated UTF-8 string
Data: "numpy"
Attribute: TITLE null
Type: 1-byte null-terminated UTF-8 string
Attribute: VERSION scalar
Type: 3-byte null-terminated UTF-8 string
Data: "2.4"
Location: 1:1024
Links: 1
Storage: 10 logical bytes, 10 allocated bytes, 100.00% utilization
Type: native signed char
H5tools-DIAG: Error detected in HDF5:tools (1.8.17) thread 140736151184320:
#000: h5tools_dump.c line 1836 in h5tools_dump_mem(): H5Sis_simple failed
major: Failure in tools library
minor: error in function
Whereas I am not seeing the error with files created with h5py:
$ h5ls -v ~/Downloads/test-h5py.h5/mydata
Opened "/Users/faltet/Downloads/test-h5py.h5" with sec2 driver.
mydata Dataset {10/10}
Location: 1:800
Links: 1
Storage: 10 logical bytes, 10 allocated bytes, 100.00% utilization
Type: native signed char
Curiously enough, both files work perfectly well when used inside their own
Python libraries, so I suspect that something weird is going on with h5ls. I
am attaching the two files for your inspection.
Thanks,
Francesc Alted
test-h5py.h5
Description: test-h5py.h5
test-pytables.h5
Description: test-pytables.h5
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