Do you have MPI installed?


Dana Robinson

Software Developer

The HDF Group


after reading you message I did issue


sudo apt-get install mpich mpich-doc


this did some :)


and now the first search for "error":


gcc version 5.4.0 20160609 (Ubuntu 5.4.0-6ubuntu1~16.04.4)

configure:4514: $? = 0

configure:4503: mpicc -V >&5

gcc: error: unrecognized command line option '-V'

gcc: fatal error: no input files

compilation terminated.

configure:4514: $? = 1

configure:4503: mpicc -qversion >&5

gcc: error: unrecognized command line option '-qversion'

gcc: fatal error: no input files

compilation terminated.

configure:4514: $? = 1

configure:4534: checking whether the C compiler works

configure:4556: mpicc       conftest.c  >&5

configure:4560: $? = 0

configure:4608: result: yes
______________________________________________________
and a few lines down

configure:5370: mpicc -E   conftest.c
conftest.c:11:28: fatal error: ac_nonexistent.h: No such file or directory
compilation terminated.
configure:5370: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "HDF5"
| #define PACKAGE_TARNAME "hdf5"
| #define PACKAGE_VERSION "1.10.1"
| #define PACKAGE_STRING "HDF5 1.10.1"
| #define PACKAGE_BUGREPORT "[email protected]"
| #define PACKAGE_URL ""
| #define PACKAGE "hdf5"
| #define VERSION "1.10.1"
| /* end confdefs.h.  */
| #include <ac_nonexistent.h>
configure:5399: checking for grep that handles long lines and -e
configure:5457: result: /bin/grep
configure:5462: checking for egrep
configure:5524: result: /bin/grep -E
configure:5529: checking for ANSI C header files
configure:5549: mpicc -c     conftest.c >&5
configure:5549: $? = 0
configure:5622: mpicc -o conftest       conftest.c  >&5
configure:5622: $? = 0
configure:5622: ./conftest
configure:5622: $? = 0
configure:5633: result: yes

______________________________________________________________

configure:5669: mpicc -c     conftest.c >&5
conftest.c: In function 'main':
conftest.c:57:21: error: expected expression before ')' token
 if (sizeof ((size_t)))
                     ^
configure:5669: $? = 1


On Fri, Jun 16, 2017 at 11:36 PM, Dana Robinson <[email protected]>
wrote:

>
>
>
> *From: *Hdf-forum <[email protected]> on behalf of
> Muhammad ILYAS <[email protected]>
> *Reply-To: *HDF List <[email protected]>
> *Date: *Friday, June 16, 2017 at 11:06
> *To: *HDF List <[email protected]>
> *Subject: *[Hdf-forum] compiling for the first time from source code
>
>
>
> Hello,
>
>
>
> This is my first attempt of building some software from source, so please
> bear with me. On a Ubuntu 16.04 installation I issued the following command:
>
>
>
> ./configure --prefix=/usr/local/HDF5 --enable-parallel
>
>
>
> in the config.log I see these lines
>
>
>
> configure:4603: error: in `/home/.../packages/hdf5-1.10.1':
>
> configure:4605: error: C compiler cannot create executables
>
> See `config.log' for more details
>
>
>
> the C compiler exists, as I have compiled zlib-1.2.11 and boost_1_64_0
>
>
>
> Kindly guide me.
>
>
>
> Thanks in advance,
>
> MI
>
> ᐧ
>
> _______________________________________________
> Hdf-forum is for HDF software users discussion.
> [email protected]
> http://lists.hdfgroup.org/mailman/listinfo/hdf-forum_lists.hdfgroup.org
> Twitter: https://twitter.com/hdf5
>

ᐧ
_______________________________________________
Hdf-forum is for HDF software users discussion.
[email protected]
http://lists.hdfgroup.org/mailman/listinfo/hdf-forum_lists.hdfgroup.org
Twitter: https://twitter.com/hdf5

Reply via email to