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https://issues.apache.org/jira/browse/HDFS-10943?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15590079#comment-15590079
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Daryn Sharp commented on HDFS-10943:
------------------------------------

Unless something has changed semi-recently, you definitely cannot roll the 
edits w/o fsn synchronization.  Kihwal was right, he's heard me grumble many 
times about the edit logs not really being thread-safe.  I think I filed a jira 
about it many years ago...

The main problem is the complex wait/notify behavior for interleaving edits and 
syncs.  Essentially the roll needs to be an atomic:  log segment end, close 
segment, open new segment, log segment start.  Relinquishing the edit log mutex 
anywhere during that transaction due to wait() may cause "very bad things" to 
happen.  Best case is an NPE when another thread tries to log between segments. 
 The sync won't matter if another spurious edit slips in after the end segment 
edit or before the start segment edit.  Must... bury... memories of scrambling 
to save the namespace of a few clusters after the standby crashed from 
corrupted edits.

The answer is track down why the fsn lock is not being held.  

> rollEditLog expects empty EditsDoubleBuffer.bufCurrent which is not guaranteed
> ------------------------------------------------------------------------------
>
>                 Key: HDFS-10943
>                 URL: https://issues.apache.org/jira/browse/HDFS-10943
>             Project: Hadoop HDFS
>          Issue Type: Bug
>            Reporter: Yongjun Zhang
>
> Per the following trace stack:
> {code}
> FATAL org.apache.hadoop.hdfs.server.namenode.FSEditLog: Error: finalize log 
> segment 10562075963, 10562174157 failed for required journal 
> (JournalAndStream(mgr=QJM to [0.0.0.1:8485, 0.0.0.2:8485, 0.0.0.3:8485, 
> 0.0.0.4:8485, 0.0.0.5:8485], stream=QuorumOutputStream starting at txid 
> 10562075963))
> java.io.IOException: FSEditStream has 49708 bytes still to be flushed and 
> cannot be closed.
>         at 
> org.apache.hadoop.hdfs.server.namenode.EditsDoubleBuffer.close(EditsDoubleBuffer.java:66)
>         at 
> org.apache.hadoop.hdfs.qjournal.client.QuorumOutputStream.close(QuorumOutputStream.java:65)
>         at 
> org.apache.hadoop.hdfs.server.namenode.JournalSet$JournalAndStream.closeStream(JournalSet.java:115)
>         at 
> org.apache.hadoop.hdfs.server.namenode.JournalSet$4.apply(JournalSet.java:235)
>         at 
> org.apache.hadoop.hdfs.server.namenode.JournalSet.mapJournalsAndReportErrors(JournalSet.java:393)
>         at 
> org.apache.hadoop.hdfs.server.namenode.JournalSet.finalizeLogSegment(JournalSet.java:231)
>         at 
> org.apache.hadoop.hdfs.server.namenode.FSEditLog.endCurrentLogSegment(FSEditLog.java:1243)
>         at 
> org.apache.hadoop.hdfs.server.namenode.FSEditLog.rollEditLog(FSEditLog.java:1172)
>         at 
> org.apache.hadoop.hdfs.server.namenode.FSImage.rollEditLog(FSImage.java:1243)
>         at 
> org.apache.hadoop.hdfs.server.namenode.FSNamesystem.rollEditLog(FSNamesystem.java:6437)
>         at 
> org.apache.hadoop.hdfs.server.namenode.NameNodeRpcServer.rollEditLog(NameNodeRpcServer.java:1002)
>         at 
> org.apache.hadoop.hdfs.protocolPB.NamenodeProtocolServerSideTranslatorPB.rollEditLog(NamenodeProtocolServerSideTranslatorPB.java:142)
>         at 
> org.apache.hadoop.hdfs.protocol.proto.NamenodeProtocolProtos$NamenodeProtocolService$2.callBlockingMethod(NamenodeProtocolProtos.java:12025)
>         at 
> org.apache.hadoop.ipc.ProtobufRpcEngine$Server$ProtoBufRpcInvoker.call(ProtobufRpcEngine.java:617)
>         at org.apache.hadoop.ipc.RPC$Server.call(RPC.java:1060)
>         at org.apache.hadoop.ipc.Server$Handler$1.run(Server.java:2086)
>         at org.apache.hadoop.ipc.Server$Handler$1.run(Server.java:2082)
>         at java.security.AccessController.doPrivileged(Native Method)
>         at javax.security.auth.Subject.doAs(Subject.java:422)
>         at 
> org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1671)
>         at org.apache.hadoop.ipc.Server$Handler.run(Server.java:2080)
> 2016-09-23 21:40:59,618 WARN 
> org.apache.hadoop.hdfs.qjournal.client.QuorumJournalManager: Aborting 
> QuorumOutputStream starting at txid 10562075963
> {code}
> The exception is from  EditsDoubleBuffer
> {code}
>  public void close() throws IOException {
>     Preconditions.checkNotNull(bufCurrent);
>     Preconditions.checkNotNull(bufReady);
>     int bufSize = bufCurrent.size();
>     if (bufSize != 0) {
>       throw new IOException("FSEditStream has " + bufSize
>           + " bytes still to be flushed and cannot be closed.");
>     }
>     IOUtils.cleanup(null, bufCurrent, bufReady);
>     bufCurrent = bufReady = null;
>   }
> {code}
> We can see that FSNamesystem.rollEditLog expects  
> EditsDoubleBuffer.bufCurrent to be empty.
> Edits are recorded via FSEditLog$logSync, which does:
> {code}
>    * The data is double-buffered within each edit log implementation so that
>    * in-memory writing can occur in parallel with the on-disk writing.
>    *
>    * Each sync occurs in three steps:
>    *   1. synchronized, it swaps the double buffer and sets the isSyncRunning
>    *      flag.
>    *   2. unsynchronized, it flushes the data to storage
>    *   3. synchronized, it resets the flag and notifies anyone waiting on the
>    *      sync.
>    *
>    * The lack of synchronization on step 2 allows other threads to continue
>    * to write into the memory buffer while the sync is in progress.
>    * Because this step is unsynchronized, actions that need to avoid
>    * concurrency with sync() should be synchronized and also call
>    * waitForSyncToFinish() before assuming they are running alone.
>    */
> {code}
> We can see that step 2 is on-purposely not synchronized to let other threads 
> to write into the memory buffer, presumbaly EditsDoubleBuffer.bufCurrent. 
> This means that the EditsDoubleBuffer.bufCurrent  can be non-empty when 
> logSync is done.
> Now if rollEditLog happens, the above exception happens.
> Another interesting observation is, the size of the EditsDoubleBuffer can be 
> as large as "private int outputBufferCapacity = 512 * 1024;", which means a 
> lot of edits could get buffered before they are flushed to JNs. 
> How can rollEdit operation expect the EditsDoubleBuffer.bufCurrent to be 
> empty? Or ask in another way, ollEdit operation want to close the stream
> {code}
> org.apache.hadoop.hdfs.server.namenode.JournalSet$JournalAndStream.closeStream(JournalSet.java:115)
> {code}
> where the close operation expects EditsDoubleBuffer.bufCurrent to be empty. 
> It  seems rollEdit should make sure the EditsDoubleBuffer is flushed in a 
> synchronized way before it tries to close the stream. Why it doesn't do that?
> If my above theory is correct, wonder why this issue doesn't show up so often.



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