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https://issues.apache.org/jira/browse/HDFS-3256?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13252240#comment-13252240
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Todd Lipcon commented on HDFS-3256:
-----------------------------------

I think there's an issue here with safemode's delayed initialization of repl 
queues. As the DNs are checking in, when the cluster transitions from 
single-rack to multi-rack, it will call processMisReplicatedBlocks, even if the 
threshold (DFS_NAMENODE_REPL_QUEUE_THRESHOLD_PCT_KEY) hasn't been crossed. I 
think you need to somehow tie this back to the flag in safemode which 
determines whether misreplicated blocks have been processed yet.
                
> HDFS considers blocks under-replicated if topology script is configured with 
> only 1 rack
> ----------------------------------------------------------------------------------------
>
>                 Key: HDFS-3256
>                 URL: https://issues.apache.org/jira/browse/HDFS-3256
>             Project: Hadoop HDFS
>          Issue Type: Bug
>    Affects Versions: 2.0.0
>            Reporter: Aaron T. Myers
>            Assignee: Aaron T. Myers
>         Attachments: HDFS-3256.patch, HDFS-3256.patch
>
>
> HDFS treats the mere presence of a topology script being configured as 
> evidence that there are multiple racks. If there is in fact only a single 
> rack, the NN will try to place the blocks on at least two racks, and thus 
> blocks will be considered to be under-replicated.

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