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https://issues.apache.org/jira/browse/HDFS-4710?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13640799#comment-13640799
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Todd Lipcon commented on HDFS-4710:
-----------------------------------

If we wrap the underlying fd in a BufferedInputStream, then we get the above 
behavior, right? A read of larger than the buffer size will skip the buffer, 
but small reads avoid small syscalls
                
> Turning off HDFS short-circuit checksums unexpectedly slows down Hive
> ---------------------------------------------------------------------
>
>                 Key: HDFS-4710
>                 URL: https://issues.apache.org/jira/browse/HDFS-4710
>             Project: Hadoop HDFS
>          Issue Type: Bug
>          Components: hdfs-client
>    Affects Versions: 2.0.4-alpha
>         Environment: Centos (EC2) + short-circuit reads on
>            Reporter: Gopal V
>            Priority: Minor
>              Labels: perfomance
>
> When short-circuit reads are on, HDFS client slows down when checksums are 
> turned off.
> With checksums on, the query takes 45.341 seconds and with it turned off, it 
> takes 56.345 seconds. This is slower than the speeds observed when 
> short-circuiting is turned off.
> The issue seems to be that FSDataInputStream.readByte() calls are directly 
> transferred to the disk fd when the checksums are turned off.
> Even though all the columns are integers, the data being read will be read 
> via DataInputStream which does
> {code}
> public final int readInt() throws IOException {
>         int ch1 = in.read();
>         int ch2 = in.read();
>         int ch3 = in.read();
>         int ch4 = in.read();
> {code}
> To confirm, an strace of the Yarn container shows
> {code}
> 26690 read(154, "B", 1)                 = 1
> 26690 read(154, "\250", 1)              = 1
> 26690 read(154, ".", 1)                 = 1
> 26690 read(154, "\24", 1)               = 1
> {code}
> To emulate this without the entirety of Hive code, I have written a simpler 
> test app 
> https://github.com/t3rmin4t0r/shortcircuit-reader
> The jar will read a file in -bs <n> sized buffers. Running it with 1 byte 
> blocks gives similar results to the Hive test run.

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