Hi Patrick,

It sounds as though you have a lot going on. It's important to gauge whether 
your frozen sections are moth-eaten due to trimming/facing the tissue too 
aggressively and tearing chunks of tissue out, if it's freezing artifact, or if 
your sample is too cold and you are getting chatter artifact. 

As for your IHC, it could be that your antibody is optimized for formalin 
fixed, paraffin embedded samples. You can fixing the tissues longer, you can 
even post fix again after sectioning and before staining and see if that helps. 
Or it could be that you need to use some heat induced retrieval for it to 
recognize the protein, and we have successfully used retrieval at 60 degrees C 
on fixed frozen sections. We avoid the high temp (>= 95 degrees C) as it could 
cause more damage to the tissue and epitopes.

You may also think about post-fixing slides with a formal-alcohol, zinc 
formalin, or alcohol-acetone and see if any of those work for your sample.

Do you have an antibody that is known to work in frozen section? If so, use 
this to optimize your detection system. Once that is optimized, it is easier to 
then optimize staining conditions with unknown antibodies.

Which antibody are you trying to stain and what tissue are you using? 

Best wishes,

Teri Johnson
Manager, Histology
Genomics Institute for
Novartis Research
Foundation
San Diego, CA
858-332-4752



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