Hi, igraph should compile just fine on Ubuntu 12.04. Did you pass any special arguments to ./configure or make, or is there anything unusual about this system that might affect the compilation process?
-- T. On Tuesday, 11 February 2014 at 10:14, Kent Mein wrote: > Hi I'm trying to install igraph-0.6.5 on an ubuntu 12.04 64bit box. > > ./configure works just fine, but durring the final link stage I'm > getting the following error. Any tips on how to fix this? > > Thanks, > > Kent Mein > > [3:06] mein@jessica % make > make all-recursive > make[1]: Entering directory `/home/staff01/mein/Downloads/igraph-0.6.5' > Making all in src > make[2]: Entering directory `/home/staff01/mein/Downloads/igraph-0.6.5/src' > make all-am > make[3]: Entering directory `/home/staff01/mein/Downloads/igraph-0.6.5/src' > /bin/bash ../libtool --tag=CXX --mode=link g++ -I../include -I../include > -Wall -I../optional/glpk -g -O2 -no-undefined -lgmp -o libigraph.la > (http://libigraph.la) -rpath /soft/python-2.7/ubuntuamd1/lib > libigraph_la-basic_query.lo libigraph_la-games.lo libigraph_la-cocitation.lo > libigraph_la-iterators.lo libigraph_la-structural_properties.lo > libigraph_la-components.lo libigraph_la-layout.lo > libigraph_la-structure_generators.lo libigraph_la-conversion.lo > libigraph_la-type_indexededgelist.lo libigraph_la-spanning_trees.lo > libigraph_la-igraph_error.lo libigraph_la-interrupt.lo libigraph_la-other.lo > libigraph_la-foreign.lo libigraph_la-random.lo libigraph_la-attributes.lo > libigraph_la-foreign-ncol-parser.lo libigraph_la-foreign-ncol-lexer.lo > libigraph_la-foreign-lgl-parser.lo libigraph_la-foreign-lgl-lexer.lo > libigraph_la-foreign-pajek-parser.lo libigraph_la-foreign-pajek-lexer.lo > libigraph_la-foreign-gml-parser.lo libigraph_la-foreign-gml-lexer.lo > libigraph_la-dqueue.lo libigraph_la-he ap.lo libigrap > h_la-igraph_heap.lo libigraph_la-igraph_stack.lo > libigraph_la-igraph_strvector.lo libigraph_la-igraph_trie.lo > libigraph_la-matrix.lo libigraph_la-vector.lo libigraph_la-vector_ptr.lo > libigraph_la-memory.lo libigraph_la-adjlist.lo libigraph_la-visitors.lo > libigraph_la-igraph_grid.lo libigraph_la-atlas.lo libigraph_la-topology.lo > libigraph_la-motifs.lo libigraph_la-progress.lo libigraph_la-operators.lo > libigraph_la-igraph_psumtree.lo libigraph_la-array.lo > libigraph_la-igraph_hashtable.lo libigraph_la-foreign-graphml.lo > libigraph_la-flow.lo libigraph_la-igraph_buckets.lo > libigraph_la-NetDataTypes.lo libigraph_la-NetRoutines.lo > libigraph_la-clustertool.lo libigraph_la-pottsmodel_2.lo > libigraph_la-spectral_properties.lo libigraph_la-cores.lo > libigraph_la-igraph_set.lo libigraph_la-cliques.lo > libigraph_la-revolver_cit.lo libigraph_la-revolver_grow.lo > libigraph_la-walktrap.lo libigraph_la-walktrap_heap.lo > libigraph_la-walktrap_graph.lo libigraph_la-walktrap_communities.lo libigraph > _la-infomap.lo libigraph_la-infomap_Greedy.lo libigraph_la-infomap_Node.lo > libigraph_la-infomap_FlowGraph.lo libigraph_la-spmatrix.lo > libigraph_la-community.lo libigraph_la-fast_community.lo > libigraph_la-evolver_cit.lo libigraph_la-gml_tree.lo > libigraph_la-bliss_orbit.lo libigraph_la-bliss_eqrefhash.lo > libigraph_la-bliss_partition.lo libigraph_la-bliss_graph.lo > libigraph_la-bliss_timer.lo libigraph_la-bliss_heap.lo > libigraph_la-bliss_utils.lo libigraph_la-bliss.lo libigraph_la-cattributes.lo > libigraph_la-revolver_ml_cit.lo libigraph_la-zeroin.lo libigraph_la-bfgs.lo > libigraph_la-math.lo libigraph_la-forestfire.lo > libigraph_la-microscopic_update.lo libigraph_la-blas.lo > libigraph_la-arpack.lo libigraph_la-centrality.lo libigraph_la-drl_layout.lo > libigraph_la-drl_parse.lo libigraph_la-drl_graph.lo > libigraph_la-DensityGrid.lo libigraph_la-gengraph_box_list.lo > libigraph_la-gengraph_degree_sequence.lo > libigraph_la-gengraph_graph_molloy_hash.lo > libigraph_la-gengraph_graph_molloy_op > timized.lo libigraph_la-gengraph_mr-connected.lo > libigraph_la-gengraph_powerlaw.lo libigraph_la-gengraph_random.lo > libigraph_la-decomposition.lo libigraph_la-bipartite.lo > libigraph_la-drl_layout_3d.lo libigraph_la-drl_graph_3d.lo > libigraph_la-DensityGrid_3d.lo libigraph_la-foreign-dl-parser.lo > libigraph_la-foreign-dl-lexer.lo libigraph_la-cs_add.lo > libigraph_la-cs_happly.lo libigraph_la-cs_pvec.lo libigraph_la-cs_amd.lo > libigraph_la-cs_house.lo libigraph_la-cs_qr.lo libigraph_la-cs_chol.lo > libigraph_la-cs_ipvec.lo libigraph_la-cs_qrsol.lo libigraph_la-cs_cholsol.lo > libigraph_la-cs_leaf.lo libigraph_la-cs_randperm.lo > libigraph_la-cs_compress.lo libigraph_la-cs_load.lo libigraph_la-cs_reach.lo > libigraph_la-cs_counts.lo libigraph_la-cs_lsolve.lo > libigraph_la-cs_scatter.lo libigraph_la-cs_cumsum.lo > libigraph_la-cs_ltsolve.lo libigraph_la-cs_scc.lo libigraph_la-cs_dfs.lo > libigraph_la-cs_lu.lo libigraph_la-cs_schol.lo libigraph_la-cs_dmperm.lo > libigraph_la-cs_lusol.lo libigraph_la > -cs_spsolve.lo libigraph_la-cs_droptol.lo libigraph_la-cs_malloc.lo > libigraph_la-cs_sqr.lo libigraph_la-cs_dropzeros.lo > libigraph_la-cs_maxtrans.lo libigraph_la-cs_symperm.lo > libigraph_la-cs_dupl.lo libigraph_la-cs_multiply.lo libigraph_la-cs_tdfs.lo > libigraph_la-cs_entry.lo libigraph_la-cs_norm.lo libigraph_la-cs_transpose.lo > libigraph_la-cs_ereach.lo libigraph_la-cs_permute.lo > libigraph_la-cs_updown.lo libigraph_la-cs_etree.lo libigraph_la-cs_pinv.lo > libigraph_la-cs_usolve.lo libigraph_la-cs_fkeep.lo libigraph_la-cs_post.lo > libigraph_la-cs_util.lo libigraph_la-cs_gaxpy.lo libigraph_la-cs_print.lo > libigraph_la-cs_utsolve.lo libigraph_la-sparsemat.lo libigraph_la-mixing.lo > libigraph_la-bigint.lo libigraph_la-bignum.lo libigraph_la-version.lo > libigraph_la-optimal_modularity.lo libigraph_la-igraph_fixed_vectorlist.lo > libigraph_la-separators.lo libigraph_la-igraph_marked_queue.lo > libigraph_la-igraph_estack.lo libigraph_la-st-cuts.lo > libigraph_la-cohesive_blocks.lo libigraph_la- > statusbar.lo libigraph_la-lapack.lo libigraph_la-complex.lo > libigraph_la-eigen.lo libigraph_la-feedback_arc_set.lo > libigraph_la-sugiyama.lo libigraph_la-glpk_support.lo > libigraph_la-igraph_hrg_types.lo libigraph_la-igraph_hrg.lo > libigraph_la-distances.lo libigraph_la-fortran_intrinsics.lo > libigraph_la-matching.lo libigraph_la-scg.lo > libigraph_la-scg_approximate_methods.lo libigraph_la-scg_exact_scg.lo > libigraph_la-scg_kmeans.lo libigraph_la-scg_utils.lo > libigraph_la-scg_optimal_method.lo libigraph_la-qsort.lo > libigraph_la-qsort_r.lo libigraph_la-types.lo libigraph_la-hacks.lo -lm > -L/soft/python-2.7/ubuntuamd1/lib -Wl,-rpath > -WL,/soft/python-2.7/ubuntuamd1/lib -lxml2 -lz -lm libf2c.la > (http://libf2c.la) libblas.la (http://libblas.la) liblapack.la > (http://liblapack.la) libdlamch.la (http://libdlamch.la) libarpack.la > (http://libarpack.la) libglpk.la (http://libglpk.la) libplfit.la > (http://libplfit.la) > libtool: link: g++ -fPIC -DPIC -shared -nostdlib > /usr/lib/gcc/x86_64-linux-gnu/4.6/../../../x86_64-linux-gnu/crti.o > /usr/lib/gcc/x86_64-linux-gnu/4.6/crtbeginS.o > .libs/libigraph_la-basic_query.o .libs/libigraph_la-games.o > .libs/libigraph_la-cocitation.o .libs/libigraph_la-iterators.o > .libs/libigraph_la-structural_properties.o .libs/libigraph_la-components.o > .libs/libigraph_la-layout.o .libs/libigraph_la-structure_generators.o > .libs/libigraph_la-conversion.o .libs/libigraph_la-type_indexededgelist.o > .libs/libigraph_la-spanning_trees.o .libs/libigraph_la-igraph_error.o > .libs/libigraph_la-interrupt.o .libs/libigraph_la-other.o > .libs/libigraph_la-foreign.o .libs/libigraph_la-random.o > .libs/libigraph_la-attributes.o .libs/libigraph_la-foreign-ncol-parser.o > .libs/libigraph_la-foreign-ncol-lexer.o > .libs/libigraph_la-foreign-lgl-parser.o > .libs/libigraph_la-foreign-lgl-lexer.o > .libs/libigraph_la-foreign-pajek-parser.o > .libs/libigraph_la-foreign-pajek-lexer.o .libs/libigraph_la-forei > gn-gml-parser.o .libs/libigraph_la-foreign-gml-lexer.o > .libs/libigraph_la-dqueue.o .libs/libigraph_la-heap.o > .libs/libigraph_la-igraph_heap.o .libs/libigraph_la-igraph_stack.o > .libs/libigraph_la-igraph_strvector.o .libs/libigraph_la-igraph_trie.o > .libs/libigraph_la-matrix.o .libs/libigraph_la-vector.o > .libs/libigraph_la-vector_ptr.o .libs/libigraph_la-memory.o > .libs/libigraph_la-adjlist.o .libs/libigraph_la-visitors.o > .libs/libigraph_la-igraph_grid.o .libs/libigraph_la-atlas.o > .libs/libigraph_la-topology.o .libs/libigraph_la-motifs.o > .libs/libigraph_la-progress.o .libs/libigraph_la-operators.o > .libs/libigraph_la-igraph_psumtree.o .libs/libigraph_la-array.o > .libs/libigraph_la-igraph_hashtable.o .libs/libigraph_la-foreign-graphml.o > .libs/libigraph_la-flow.o .libs/libigraph_la-igraph_buckets.o > .libs/libigraph_la-NetDataTypes.o .libs/libigraph_la-NetRoutines.o > .libs/libigraph_la-clustertool.o .libs/libigraph_la-pottsmodel_2.o > .libs/libigraph_la-spectral_properties.o .libs/libigr > aph_la-cores.o .libs/libigraph_la-igraph_set.o .libs/libigraph_la-cliques.o > .libs/libigraph_la-revolver_cit.o .libs/libigraph_la-revolver_grow.o > .libs/libigraph_la-walktrap.o .libs/libigraph_la-walktrap_heap.o > .libs/libigraph_la-walktrap_graph.o .libs/libigraph_la-walktrap_communities.o > .libs/libigraph_la-infomap.o .libs/libigraph_la-infomap_Greedy.o > .libs/libigraph_la-infomap_Node.o .libs/libigraph_la-infomap_FlowGraph.o > .libs/libigraph_la-spmatrix.o .libs/libigraph_la-community.o > .libs/libigraph_la-fast_community.o .libs/libigraph_la-evolver_cit.o > .libs/libigraph_la-gml_tree.o .libs/libigraph_la-bliss_orbit.o > .libs/libigraph_la-bliss_eqrefhash.o .libs/libigraph_la-bliss_partition.o > .libs/libigraph_la-bliss_graph.o .libs/libigraph_la-bliss_timer.o > .libs/libigraph_la-bliss_heap.o .libs/libigraph_la-bliss_utils.o > .libs/libigraph_la-bliss.o .libs/libigraph_la-cattributes.o > .libs/libigraph_la-revolver_ml_cit.o .libs/libigraph_la-zeroin.o > .libs/libigraph_la-bfgs.o .libs/libigrap > h_la-math.o .libs/libigraph_la-forestfire.o > .libs/libigraph_la-microscopic_update.o .libs/libigraph_la-blas.o > .libs/libigraph_la-arpack.o .libs/libigraph_la-centrality.o > .libs/libigraph_la-drl_layout.o .libs/libigraph_la-drl_parse.o > .libs/libigraph_la-drl_graph.o .libs/libigraph_la-DensityGrid.o > .libs/libigraph_la-gengraph_box_list.o > .libs/libigraph_la-gengraph_degree_sequence.o > .libs/libigraph_la-gengraph_graph_molloy_hash.o > .libs/libigraph_la-gengraph_graph_molloy_optimized.o > .libs/libigraph_la-gengraph_mr-connected.o > .libs/libigraph_la-gengraph_powerlaw.o .libs/libigraph_la-gengraph_random.o > .libs/libigraph_la-decomposition.o .libs/libigraph_la-bipartite.o > .libs/libigraph_la-drl_layout_3d.o .libs/libigraph_la-drl_graph_3d.o > .libs/libigraph_la-DensityGrid_3d.o .libs/libigraph_la-foreign-dl-parser.o > .libs/libigraph_la-foreign-dl-lexer.o .libs/libigraph_la-cs_add.o > .libs/libigraph_la-cs_happly.o .libs/libigraph_la-cs_pvec.o > .libs/libigraph_la-cs_amd.o .libs/libigraph_la-cs_h > ouse.o .libs/libigraph_la-cs_qr.o .libs/libigraph_la-cs_chol.o > .libs/libigraph_la-cs_ipvec.o .libs/libigraph_la-cs_qrsol.o > .libs/libigraph_la-cs_cholsol.o .libs/libigraph_la-cs_leaf.o > .libs/libigraph_la-cs_randperm.o .libs/libigraph_la-cs_compress.o > .libs/libigraph_la-cs_load.o .libs/libigraph_la-cs_reach.o > .libs/libigraph_la-cs_counts.o .libs/libigraph_la-cs_lsolve.o > .libs/libigraph_la-cs_scatter.o .libs/libigraph_la-cs_cumsum.o > .libs/libigraph_la-cs_ltsolve.o .libs/libigraph_la-cs_scc.o > .libs/libigraph_la-cs_dfs.o .libs/libigraph_la-cs_lu.o > .libs/libigraph_la-cs_schol.o .libs/libigraph_la-cs_dmperm.o > .libs/libigraph_la-cs_lusol.o .libs/libigraph_la-cs_spsolve.o > .libs/libigraph_la-cs_droptol.o .libs/libigraph_la-cs_malloc.o > .libs/libigraph_la-cs_sqr.o .libs/libigraph_la-cs_dropzeros.o > .libs/libigraph_la-cs_maxtrans.o .libs/libigraph_la-cs_symperm.o > .libs/libigraph_la-cs_dupl.o .libs/libigraph_la-cs_multiply.o > .libs/libigraph_la-cs_tdfs.o .libs/libigraph_la-cs_entry.o .libs/ > libigraph_la-cs_norm.o .libs/libigraph_la-cs_transpose.o > .libs/libigraph_la-cs_ereach.o .libs/libigraph_la-cs_permute.o > .libs/libigraph_la-cs_updown.o .libs/libigraph_la-cs_etree.o > .libs/libigraph_la-cs_pinv.o .libs/libigraph_la-cs_usolve.o > .libs/libigraph_la-cs_fkeep.o .libs/libigraph_la-cs_post.o > .libs/libigraph_la-cs_util.o .libs/libigraph_la-cs_gaxpy.o > .libs/libigraph_la-cs_print.o .libs/libigraph_la-cs_utsolve.o > .libs/libigraph_la-sparsemat.o .libs/libigraph_la-mixing.o > .libs/libigraph_la-bigint.o .libs/libigraph_la-bignum.o > .libs/libigraph_la-version.o .libs/libigraph_la-optimal_modularity.o > .libs/libigraph_la-igraph_fixed_vectorlist.o .libs/libigraph_la-separators.o > .libs/libigraph_la-igraph_marked_queue.o .libs/libigraph_la-igraph_estack.o > .libs/libigraph_la-st-cuts.o .libs/libigraph_la-cohesive_blocks.o > .libs/libigraph_la-statusbar.o .libs/libigraph_la-lapack.o > .libs/libigraph_la-complex.o .libs/libigraph_la-eigen.o > .libs/libigraph_la-feedback_arc_set.o .libs/libigr > aph_la-sugiyama.o .libs/libigraph_la-glpk_support.o > .libs/libigraph_la-igraph_hrg_types.o .libs/libigraph_la-igraph_hrg.o > .libs/libigraph_la-distances.o .libs/libigraph_la-fortran_intrinsics.o > .libs/libigraph_la-matching.o .libs/libigraph_la-scg.o > .libs/libigraph_la-scg_approximate_methods.o > .libs/libigraph_la-scg_exact_scg.o .libs/libigraph_la-scg_kmeans.o > .libs/libigraph_la-scg_utils.o .libs/libigraph_la-scg_optimal_method.o > .libs/libigraph_la-qsort.o .libs/libigraph_la-qsort_r.o > .libs/libigraph_la-types.o .libs/libigraph_la-hacks.o -Wl,--whole-archive > ./.libs/libf2c.a ./.libs/libblas.a ./.libs/liblapack.a ./.libs/libdlamch.a > ./.libs/libarpack.a ./.libs/libglpk.a ./.libs/libplfit.a > -Wl,--no-whole-archive -Wl,-rpath -Wl,/soft/python-2.7/ubuntuamd1/lib > -Wl,-rpath -Wl,/soft/python-2.7/ubuntuamd1/lib > -L/soft/python-2.7/ubuntuamd1/lib /soft/python-2.7/ubuntuamd1/lib/libxml2.so > -lz -lgmp -L/usr/lib/gcc/x86_64-linux-gnu/4.6 > -L/usr/lib/gcc/x86_64-linux-gnu/4.6/../../../x86_64-li > nux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.6/../../../../lib > -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu > -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.6/../../.. -lstdc++ -lm > -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/4.6/crtendS.o > /usr/lib/gcc/x86_64-linux-gnu/4.6/../../../x86_64-linux-gnu/crtn.o -O2 > -Wl,-rpath -Wl,-soname -Wl,libigraph.so.0 -o .libs/libigraph.so.0.0.0 > /usr/bin/ld: cannot find libigraph.so.0: No such file or directory > collect2: ld returned 1 exit status > make[3]: *** [libigraph.la (http://libigraph.la)] Error 1 > make[3]: Leaving directory `/home/staff01/mein/Downloads/igraph-0.6.5/src' > make[2]: *** [all] Error 2 > make[2]: Leaving directory `/home/staff01/mein/Downloads/igraph-0.6.5/src' > make[1]: *** [all-recursive] Error 1 > make[1]: Leaving directory `/home/staff01/mein/Downloads/igraph-0.6.5' > make: *** [all] Error 2 > > > -- > [email protected] (mailto:[email protected]) > http://www.cs.umn.edu/~mein > > _______________________________________________ > igraph-help mailing list > [email protected] (mailto:[email protected]) > https://lists.nongnu.org/mailman/listinfo/igraph-help _______________________________________________ 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