> is the reason of slowing down the code because the attributes of "igraph.vs" 
> or "igraph.es" occupies more memory?

I don't think that makes a significant difference, unless igraph.vs()
is doing something weird behind the scenes (theoretically, it should
only be a wrapper that encapsulates the vertex indices). However, I'm
not too familiar with the internals of the R interface so Gábor can
probably answer this way better than me.

T.

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