Maurice,

The work is just a symlink to /var/cache/tomcat6. So i think try to
stop tomcat and then remove everything in that folder. And then start
tomcat and deploy again the OpenMRS webapp.

Did you play or change anything in the catalina policy in the conf folder?


On Mon, Oct 3, 2011 at 7:13 PM, Maurice Barasa <[email protected]> wrote:
> My syslog seems not to be working well, I restarted rsyslogd and now I'm
> getting the following error from (tail -f /var/log/syslog |grep jsvc) . My
> work folder is in tomcat6 directory is owned by root.root
> Oct 3 18:47:56 omrs jsvc.exec[4359]: Oct 3, 2011 6:47:56 PM
> org.apache.catalina.core.StandardService stop#012INFO: Stopping service
> Catalina#012Oct 3, 2011 6:47:56 PM
> org.apache.catalina.session.StandardManager doUnload#012SEVERE: IOException
> while saving persisted sessions: java.io.FileNotFoundException:
> /var/lib/tomcat6/work/Catalina/localhost/_/SESSIONS.ser (No such file or
> directory)#012java.io.FileNotFoundException:
> /var/lib/tomcat6/work/Catalina/localhost/_/SESSIONS.ser (No such file or
> directory)#012#011at java.io.FileOutputStream.open(Native Method)#012#011at
> java.io.FileOutputStream.<init>(FileOutputStream.java:179)#012#011at
> java.io.FileOutputStream.<init>(FileOutputStream.java:70)#012#011at
> org.apache.catalina.session.StandardManager.doUnload(StandardManager.java:489)#012#011at
> org.apache.catalina.session.StandardManager.unload(StandardManager.java:463)#012#011at
> org.apache.catalina.session.StandardManager.stop(StandardManager.java:667)#012#011at
> org.apache.catalina.core.StandardContext.stop(StandardContext.java:4573)#012#011at
> org.apache.catalina.core.ContainerBase.removeChild(ContainerBase.
> Oct 3 18:47:56 omrs jsvc.exec[4359]: java:924)#012#011at
> org.apache.catalina.startup.HostConfig.undeployApps(HostConfig.java:1300)#012#011at
> org.apache.catalina.startup.HostConfig.stop(HostConfig.java:1271)#012#011at
> org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:323)#012#011at
> org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:119)#012#011at
> org.apache.catalina.core.ContainerBase.stop(ContainerBase.java:1086)#012#011at
> org.apache.catalina.core.ContainerBase.stop(ContainerBase.java:1098)#012#011at
> org.apache.catalina.core.StandardEngine.stop(StandardEngine.java:448)#012#011at
> org.apache.catalina.core.StandardService.stop(StandardService.java:584)#012#011at
> org.apache.catalina.core.StandardServer.stop(StandardServer.java:744)#012#011at
> org.apache.catalina.startup.Catalina.stop(Catalina.java:633)#012#011at
> sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)#012#011at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)#012#011at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)#012#011at
> java.lang.reflect.M
>
> On Mon, Oct 3, 2011 at 12:02 PM, Rafal Korytkowski <[email protected]>
> wrote:
>>
>> Yes, Tomcat should be running before you copy the war file.
>>
>> All folders are in Tomcat installation directory (at least in zipped
>> distributions).
>>
>> You could also try entering Tomcat manager and deploying war via web
>> typically through http://localhost:8080/manager/html. If it doesn't
>> help, just reinstall your Tomcat.
>>
>> -Rafal
>>
>> On 3 October 2011 10:38, Maurice Barasa <[email protected]> wrote:
>> > Thanks a lot for your advice,
>> > I have checked the md5 for the openmrs.war file and its the same as
>> > what's
>> > on the sourceforge download page.
>> > chaning ownership to tomcat6.tomcat6
>> > Tried another webapp but its not expanding too.
>> > Where is the "temp" folder?
>> > The "work" folder only has on the server only has catalina.policy file.
>> > When
>> > removing the previous openmrs.war I had stopped tomcat6.
>> > My problem is that the log files are created but no logs are added into
>> > it,
>> > because this would have helped me identify the errors.
>> > Just confirming, should tomcat6 be running before I copy the .war file?
>> > Regards
>> > Maurice
>> > On Mon, Oct 3, 2011 at 10:35 AM, Nyoman Ribeka <[email protected]>
>> > wrote:
>> >>
>> >> If the war file is not expanded, then that means the permissions for
>> >> the war file probably not correct or the file is corrupted. Check the
>> >> md5 like Ben suggested in previous email and make sure the file is
>> >> owned by tomcat6.tomcat6 and the permissions for the file is 644 in
>> >> ubuntu.
>> >>
>> >> $ md5sum openmrs.war
>> >> $ sudo chown tomcat6.tomcat6 openmrs.war
>> >> $ sudo chmod 644 openmrs.war
>> >>
>> >>
>> >> On Mon, Oct 3, 2011 at 10:15 AM, Maurice Barasa <[email protected]>
>> >> wrote:
>> >> > I have run md5sum on it and I get the same hash as the one on the
>> >> > OpenMRS
>> >> > sourceforge download page (7576595aed64f5409bef17033ac29e6e). I have
>> >> > tried
>> >> > "locate *.log" and cant locate any other place that tomcat6 could be
>> >> > logging
>> >> > to.
>> >> > Thanks again.
>> >> >
>> >> > On Mon, Oct 3, 2011 at 7:50 AM, Ben Wolfe <[email protected]> wrote:
>> >> >>
>> >> >> Make sure your war file isn't corrupt. Run an md5sum on it ok your
>> >> >> server
>> >> >> and on the known working one. I think sourceforge discuss have md5s
>> >> >> with the
>> >> >> links too.
>> >> >>
>> >> >> Also make sure you're looking got los in the right place. Ubuntu
>> >> >> puts
>> >> >> them
>> >> >> in a few different weird places.
>> >> >>
>> >> >> Ben
>> >> >>
>> >> >> On Oct 2, 2011 11:48 PM, "Maurice Barasa" <[email protected]> wrote:
>> >> >> > The user has write access to log files, OpenMRS was running before
>> >> >> > but
>> >> >> > then
>> >> >> > I undeployed because I was getting errors when starting OpenMRS in
>> >> >> > that
>> >> >> > the
>> >> >> > logic module couldn't start.
>> >> >> >
>> >> >> > I removed openmrs.war + the openmrs folder in the webapps but
>> >> >> > openmrs
>> >> >> > didnt
>> >> >> > start and the .war file wasnt expanded either.
>> >> >> >
>> >> >> > Regards,
>> >> >> >
>> >> >> >
>> >> >> > On Sun, Oct 2, 2011 at 9:21 PM, Burke Mamlin
>> >> >> > <[email protected]>wrote:
>> >> >> >
>> >> >> >> OpenMRS should be writing to the logs during startup including, I
>> >> >> >> believe,
>> >> >> >> if the database connection fails. Can you verify that the process
>> >> >> >> running
>> >> >> >> the war (i.e., tomcat user) has write-access to the log files?
>> >> >> >> You
>> >> >> >> may
>> >> >> >> not
>> >> >> >> be seeing any log entries because the war cannot reach the logs.
>> >> >> >>
>> >> >> >> -Burke
>> >> >> >>
>> >> >> >>
>> >> >> >> On Sun, Oct 2, 2011 at 11:34 AM, Maurice Barasa
>> >> >> >> <[email protected]>
>> >> >> >> wrote:
>> >> >> >>
>> >> >> >>> Hi All,
>> >> >> >>>
>> >> >> >>> What would cause Openmrs.war file fail to start after deploying.
>> >> >> >>> problem
>> >> >> >>> is that tomcat logs are not showing anything. cleared the logs
>> >> >> >>> to a
>> >> >> >>> folder
>> >> >> >>> to have a fresh set of log files to be able to easily detect the
>> >> >> >>> problem but
>> >> >> >>> the logs are not being updated with any error still nothing
>> >> >> >>> shows
>> >> >> >>> up
>> >> >> >>> in the
>> >> >> >>> new log files.
>> >> >> >>>
>> >> >> >>> Regards,
>> >> >> >>>
>> >> >> >>> *Maurice Barasa*
>> >> >> >>>
>> >> >> >> ------------------------------
>> >> >> >> Click here to
>> >> >> >>
>> >> >> >>
>> >> >> >> unsubscribe<[email protected]?body=SIGNOFF%20openmrs-implement-l>from
>> >> >> >> OpenMRS Implementers' mailing list
>> >> >> >
>> >> >> >
>> >> >> >
>> >> >> >
>> >> >> > --
>> >> >> > *Maurice Barasa*
>> >> >> > __________________________
>> >> >> > Skype:mouriceb
>> >> >> > Yahoo messenger:baramori
>> >> >> > Cell: +254722853117
>> >> >> >
>> >> >> > _________________________________________
>> >> >> >
>> >> >> > To unsubscribe from OpenMRS Implementers' mailing list, send an
>> >> >> > e-mail
>> >> >> > to [email protected] with "SIGNOFF openmrs-implement-l"
>> >> >> > in
>> >> >> > the
>> >> >> > body (not the subject) of your e-mail.
>> >> >> >
>> >> >> >
>> >> >> >
>> >> >> > [mailto:[email protected]?body=SIGNOFF%20openmrs-implement-l]
>> >> >> ________________________________
>> >> >> Click here to unsubscribe from OpenMRS Implementers' mailing list
>> >> >
>> >> >
>> >> > --
>> >> > Maurice Barasa
>> >> > __________________________
>> >> > Skype:mouriceb
>> >> > Yahoo messenger:baramori
>> >> > Cell: +254722853117
>> >> >
>> >> > ________________________________
>> >> > Click here to unsubscribe from OpenMRS Implementers' mailing list
>> >>
>> >>
>> >>
>> >> --
>> >> Thanks,
>> >>
>> >> Nyoman Ribeka
>> >>
>> >> _________________________________________
>> >>
>> >> To unsubscribe from OpenMRS Implementers' mailing list, send an e-mail
>> >> to
>> >> [email protected] with "SIGNOFF openmrs-implement-l" in the
>> >>  body
>> >> (not the subject) of your e-mail.
>> >>
>> >> [mailto:[email protected]?body=SIGNOFF%20openmrs-implement-l]
>> >
>> >
>> > ________________________________
>> > Click here to unsubscribe from OpenMRS Implementers' mailing list
>>
>> _________________________________________
>>
>> To unsubscribe from OpenMRS Implementers' mailing list, send an e-mail to
>> [email protected] with "SIGNOFF openmrs-implement-l" in the  body
>> (not the subject) of your e-mail.
>>
>> [mailto:[email protected]?body=SIGNOFF%20openmrs-implement-l]
>
>
>
> --
> Maurice Barasa
> __________________________
> Skype:mouriceb
> Yahoo messenger:baramori
> Cell: +254722853117
>
> ________________________________
> Click here to unsubscribe from OpenMRS Implementers' mailing list



-- 
Thanks,

Nyoman Ribeka

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