Hi guys, Some additional thoughts -- as Curtis points out, if the Size of the 3D images from different time points is not the same, a 4D VectorImage will not work well. In ITKv4, a new set of classes [1] was added to handle time explicitly. However, it has its own IO framework [2], so it may take some thought on how ITK-SCIFIO could mesh with this cleanly.
Thanks, Matt [1] http://www.itk.org/Doxygen/html/group__Group-Video.html [2] http://www.itk.org/Doxygen/html/group__ITKVideoIO.html On Tue, Jul 2, 2013 at 7:10 PM, Curtis Rueden <[email protected]> wrote: > Hi Kedar, > > Thanks for exercising the new code! I have a question, and a request. First, > the latter: we just created a new SCIFIO mailing list (CCed). Can we please > discuss these technical issues on the public list from now on? > > And my question: can you describe your need for the Vector image type in a > little more detail? From my (limited) perspective, using an ITK vector > image type to represent multiple N-D Image blocks, which may have differing > dimensional extents, is fundamentally unworkable. Is there another way to > accomplish your goals? > > Regards, > Curtis > > P.S. I spoke with Mark this morning about a possible alternative approach > for requesting specific Images (i.e. "series") from the SCIFIO ImageIO: > encode it in the file path string somehow. > > On Jul 2, 2013 1:24 PM, "Kedar Grama" <[email protected]> wrote: >> >> Hi Mark, >> >> Thanks for working on the vector image support through SCIFIO. I have >> shared a nrrd file with you on google docs. When I read it with the >> ITK-SCIFIO reader it switches the bit ordering LittleEndian/BigEndian >> whereas if I read it in Fiji or build ITK without SCIFIO it is read >> properly. To test this you can use the ITK reader example and write the >> image out as a tiff while building with/without SCIFIO. >> >> Thanks, >> >> -Kedar _______________________________________________ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Kitware offers ITK Training Courses, for more information visit: http://kitware.com/products/protraining.php Please keep messages on-topic and check the ITK FAQ at: http://www.itk.org/Wiki/ITK_FAQ Follow this link to subscribe/unsubscribe: http://www.itk.org/mailman/listinfo/insight-developers
