Ok, that makes sense. Would it be sensible to change the threshold for those on debug builds?
On Tue, 1 Dec 2015 at 09:22 Dženan Zukić <[email protected]> wrote: > If you are running tests in debug, some of them are too slow and time out. > > On Tue, Dec 1, 2015 at 9:19 AM, Simon Alexander <[email protected]> > wrote: > >> Hi Matt, >> >> So I pulled origin/master and rebuilt last night. I have different >> failures now, all by timeout: >> >> *Total Test time (real) = 6363.39 sec* >> >> *The following tests FAILED:* >> * 726 - itkFastMarchingImageFilterTest_wm_multipleSeeds_NoTopo >> (Timeout)* >> * 727 - itkFastMarchingImageFilterTest_wm_multipleSeeds_StrictTopo >> (Timeout)* >> * 728 - >> itkFastMarchingImageFilterTest_wm_multipleSeeds_NoHandlesTopo (Timeout)* >> * 2025 - >> itkTimeVaryingBSplineVelocityFieldPointSetRegistrationTest (Timeout)* >> *Errors while running CTest* >> >> >> Any thoughts on what's going on there? >> >> >> On Mon, 30 Nov 2015 at 20:42 Matt McCormick <[email protected]> >> wrote: >> >>> Hi Simon, >>> >>> I am returning from holiday, and also catching up on activity. >>> >>> >>> Hyun Jae has taken care of the KWStyle warnings and the data conversion >>> warning: >>> >>> http://review.source.kitware.com/#/c/20430/ >>> http://review.source.kitware.com/#/c/20446/ >>> >>> >>> And Dzenan and Bill have addressed Wiki examples errors: >>> >>> https://github.com/InsightSoftwareConsortium/ITKWikiExamples/pull/3 >>> >>> >>> It is likely that the test failures on your build still remain. Did you >>> want to take them on? >>> >>> Thanks, >>> Matt >>> >>> On Mon, Nov 30, 2015 at 2:00 PM, Dženan Zukić <[email protected]> wrote: >>> >>>> Looking at the master branch is the right thing to do. I am not doing >>>> any active development regarding this right now. >>>> >>>> On Mon, Nov 30, 2015 at 1:53 PM, Simon Alexander <[email protected] >>>> > wrote: >>>> >>>>> Hi All, >>>>> >>>>> I had hoped to be able to look at this over the weekend, but no such >>>>> luck. Is there somewhere useful I can help with it now? Not sure what >>>>> state we are in (or what branch). >>>>> >>>>> On Wed, 25 Nov 2015 at 16:41 Dženan Zukić <[email protected]> wrote: >>>>> >>>>>> It turns out that all the compile errors were occurring in >>>>>> WikiExamples. I solved all except one: >>>>>> ITK_FIXED_PARAMETERS_ARE_DOUBLE is not defined in >>>>>> file ITK\Modules\Remote\WikiExamples\Utilities\FileOutputWindow.cxx line >>>>>> 23, but it should be judging from the comment on that line. >>>>>> >>>>>> For the rest, I created a pull request: >>>>>> https://github.com/InsightSoftwareConsortium/ITKWikiExamples/pull/3 >>>>>> >>>>>> On Wed, Nov 25, 2015 at 4:08 PM, Simon Alexander < >>>>>> [email protected]> wrote: >>>>>> >>>>>>> Perfect. I'm under a deadline that is likely to eat the rest of the >>>>>>> week but if that clears up I'll try and jump in earlier. >>>>>>> >>>>>>> On Wed, 25 Nov 2015 at 16:06 Dženan Zukić <[email protected]> wrote: >>>>>>> >>>>>>>> OK I will work on it for an hour or two now, and I will make a >>>>>>>> branch and push it to Gerrit so whoever wants can pick up from there >>>>>>>> and >>>>>>>> keep updating it. >>>>>>>> >>>>>>>> On Wed, Nov 25, 2015 at 4:02 PM, Simon Alexander < >>>>>>>> [email protected]> wrote: >>>>>>>> >>>>>>>>> Makes sense. At this point I am unlikely to have time to look at >>>>>>>>> this until Saturday, but have hopes for a few free hours there. >>>>>>>>> >>>>>>>>> On Wed, 25 Nov 2015 at 15:58 Dženan Zukić <[email protected]> >>>>>>>>> wrote: >>>>>>>>> >>>>>>>>>> Building git master from Nov 23rd with examples and testing >>>>>>>>>> enabled I get 14 compile errors in VS2015 debug x64. Should we >>>>>>>>>> coordinate >>>>>>>>>> our efforts in fixing them? >>>>>>>>>> >>>>>>>>>> On Wed, Nov 25, 2015 at 11:29 AM, Simon Alexander < >>>>>>>>>> [email protected]> wrote: >>>>>>>>>> >>>>>>>>>>> Two of the three failures look like truncation issues (like >>>>>>>>>>> https://open.cdash.org/testDetails.php?test=395263772&build=4117158 >>>>>>>>>>> ) >>>>>>>>>>> >>>>>>>>>>> The other ( >>>>>>>>>>> https://open.cdash.org/testDetails.php?test=395264938&build=4117158) >>>>>>>>>>> is less obvious. >>>>>>>>>>> >>>>>>>>>>> If I have time this evening I'll try and have a look at these. >>>>>>>>>>> >>>>>>>>>>> Is your standard test build in 32 bit ? That might explain the >>>>>>>>>>> difference if there are some underlying type assumptions, but not >>>>>>>>>>> obvious >>>>>>>>>>> why 2015 would trigger but not 2013. >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> On Wed, 25 Nov 2015 at 11:01 Matt McCormick < >>>>>>>>>>> [email protected]> wrote: >>>>>>>>>>> >>>>>>>>>>>> Ah, cool! Here: >>>>>>>>>>>> >>>>>>>>>>>> >>>>>>>>>>>> https://open.cdash.org/viewBuildError.php?type=1&buildid=4117158 >>>>>>>>>>>> >>>>>>>>>>>> Could you please look into the test failures? >>>>>>>>>>>> >>>>>>>>>>>> @Hyun Jae, could you please look into the KWStyle warnings? >>>>>>>>>>>> >>>>>>>>>>>> Thanks, >>>>>>>>>>>> Matt >>>>>>>>>>>> >>>>>>>>>>>> >>>>>>>>>>>> On Wed, Nov 25, 2015 at 10:55 AM, Simon Alexander < >>>>>>>>>>>> [email protected]> wrote: >>>>>>>>>>>> > Sorry, if I wasn't clear - I submitted two builds yesterday >>>>>>>>>>>> from SIMON-LAP, >>>>>>>>>>>> > (actually 3 as I wasn't sure the config was right on the >>>>>>>>>>>> first one). VS2013 >>>>>>>>>>>> > was green, three failures on VS2015 (and 18 warnings). >>>>>>>>>>>> Looks like a >>>>>>>>>>>> > truncation problem on the resuts. >>>>>>>>>>>> > >>>>>>>>>>>> > On Wed, 25 Nov 2015 at 10:51 Matt McCormick < >>>>>>>>>>>> [email protected]> >>>>>>>>>>>> > wrote: >>>>>>>>>>>> >> >>>>>>>>>>>> >> Hi Simon, >>>>>>>>>>>> >> >>>>>>>>>>>> >> Thanks for testing. >>>>>>>>>>>> >> >>>>>>>>>>>> >> We have a Visual Studio 2015 build on the dashboard that is >>>>>>>>>>>> green: >>>>>>>>>>>> >> >>>>>>>>>>>> >> https://open.cdash.org/buildSummary.php?buildid=4117955 >>>>>>>>>>>> >> >>>>>>>>>>>> >> Are there any different flags? Could you please submit an >>>>>>>>>>>> Experimental >>>>>>>>>>>> >> build? >>>>>>>>>>>> >> >>>>>>>>>>>> >> ctest -j 4 -M Experimental -T Configure -T Build -T Test >>>>>>>>>>>> -T Submit -C >>>>>>>>>>>> >> Release >>>>>>>>>>>> >> >>>>>>>>>>>> >> from a fresh build tree. >>>>>>>>>>>> >> >>>>>>>>>>>> >> Thanks, >>>>>>>>>>>> >> Matt >>>>>>>>>>>> >> >>>>>>>>>>>> >> On Wed, Nov 25, 2015 at 9:07 AM, Simon Alexander < >>>>>>>>>>>> [email protected]> >>>>>>>>>>>> >> wrote: >>>>>>>>>>>> >> > Looks like a few problems with x64 build on visual studio >>>>>>>>>>>> 2015 - do you >>>>>>>>>>>> >> > have >>>>>>>>>>>> >> > a test machine in this configuration? >>>>>>>>>>>> >> > >>>>>>>>>>>> >> > On Mon, 23 Nov 2015 at 17:53 Matt McCormick < >>>>>>>>>>>> [email protected]> >>>>>>>>>>>> >> > wrote: >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> On behalf of the Insight Toolkit community, we are proud >>>>>>>>>>>> to announce >>>>>>>>>>>> >> >> that >>>>>>>>>>>> >> >> ITK 4.9 release candidate 1 has been tagged and is >>>>>>>>>>>> available for >>>>>>>>>>>> >> >> testing! >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Please take this opportunity to test the new features in >>>>>>>>>>>> the release >>>>>>>>>>>> >> >> candidate. >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> To obtain the source code, >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> git clone http://itk.org/ITK.git >>>>>>>>>>>> >> >> cd ITK >>>>>>>>>>>> >> >> git checkout -q --detach v4.9rc01 >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> For more details, please see the Git documentation [1]. >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> A few selected highlights for this release: >>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> * New Remote modules: the Cuberille module for smooth >>>>>>>>>>>> generation of >>>>>>>>>>>> >> >> meshes >>>>>>>>>>>> >> >> from binary segmentation images, and the >>>>>>>>>>>> AnisotropicDiffusionLBR module >>>>>>>>>>>> >> >> improved edge-preserving smoothing. >>>>>>>>>>>> >> >> * Build your own ITK module outside the source tree, add >>>>>>>>>>>> continuous >>>>>>>>>>>> >> >> integration testing on GitHub, and easily add Python >>>>>>>>>>>> wrapping for your >>>>>>>>>>>> >> >> C++ >>>>>>>>>>>> >> >> algorithms. >>>>>>>>>>>> >> >> * Python wrapping, including Python 3, builds faster with >>>>>>>>>>>> a more >>>>>>>>>>>> >> >> standard >>>>>>>>>>>> >> >> installation >>>>>>>>>>>> >> >> * Improved performance of itk::Image::GetPixel and >>>>>>>>>>>> operations on >>>>>>>>>>>> >> >> itk::VariableLengthVector’s >>>>>>>>>>>> >> >> * Generate a FlatStructuringElement from an image >>>>>>>>>>>> >> >> * Point-set registration with time-varying B-splines >>>>>>>>>>>> >> >> * Module dependencies can now be specified as public / >>>>>>>>>>>> private / >>>>>>>>>>>> >> >> compile / >>>>>>>>>>>> >> >> test >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Please test the release candidate and share your >>>>>>>>>>>> experiences on the >>>>>>>>>>>> >> >> mailing list, issue tracker, and Gerrit Code Review. The >>>>>>>>>>>> new module >>>>>>>>>>>> >> >> dependency specification mechanism may unearth missing >>>>>>>>>>>> dependencies for >>>>>>>>>>>> >> >> projects that use ITK COMPONENTS with the CMake >>>>>>>>>>>> find_package command. >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> An Experimental build, which demonstrates how the test >>>>>>>>>>>> suite performs >>>>>>>>>>>> >> >> on >>>>>>>>>>>> >> >> your local build system, can be submitted to the >>>>>>>>>>>> dashboard [2] with: >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> mkdir ../ITK-build >>>>>>>>>>>> >> >> cd ../ITK-build >>>>>>>>>>>> >> >> cmake ../ITK >>>>>>>>>>>> >> >> ctest -j 4 -M Experimental -T Configure -T Build -T >>>>>>>>>>>> Test -T Submit >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Visual Studio builds must also add “-C Release” to the >>>>>>>>>>>> ctest command. >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Notify the mailing list if there are any unexpected >>>>>>>>>>>> failures. Testing >>>>>>>>>>>> >> >> your own applications against the RC is also appreciated. >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Congratulations and well done to the 35 contributors to >>>>>>>>>>>> this release. >>>>>>>>>>>> >> >> We >>>>>>>>>>>> >> >> would especially like to recognize the new contributors: >>>>>>>>>>>> Mikhail >>>>>>>>>>>> >> >> Isakov, >>>>>>>>>>>> >> >> Betsy McPhail, Alexander Leinoff, Shawn Waldon, Tobias >>>>>>>>>>>> Wood, Seun >>>>>>>>>>>> >> >> Odutola, >>>>>>>>>>>> >> >> Hyun Jae Kang, Lucas Gandel, Adam Snyder, Junjie Bai, >>>>>>>>>>>> Pablo >>>>>>>>>>>> >> >> Hernandez-Cerdan, Abhishek Tiwari, Eugene Prilepin, Zach >>>>>>>>>>>> Williamson, >>>>>>>>>>>> >> >> Luc >>>>>>>>>>>> >> >> Hermitte, Laurentiu Nicola, and Floris Berendsen. >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> The final release is scheduled for mid-December. >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> [1] http://www.itk.org/Wiki/ITK/Git >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> [2] http://open.cdash.org/index.php?project=Insight >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> New Features >>>>>>>>>>>> >> >> --------------------- >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Wrapping improvements >>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> * Python 3 supported >>>>>>>>>>>> >> >> * Wrapping builds much faster due to CastXML binaries >>>>>>>>>>>> >> >> * LandmarkBasedTransformInitializer now wrapped >>>>>>>>>>>> >> >> * NumPy bridge with VisualStudio >>>>>>>>>>>> >> >> * Wrapping for the MinimalPathExtraction module >>>>>>>>>>>> >> >> * Wrapping is now installed into Python’s site-packages >>>>>>>>>>>> directory in >>>>>>>>>>>> >> >> the >>>>>>>>>>>> >> >> “itk” package >>>>>>>>>>>> >> >> * Wrapping package size is decreased >>>>>>>>>>>> >> >> * Better package portability on Mac OSX >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> New Remote Modules >>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^ >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> * Cuberille >>>>>>>>>>>> >> >> * Insight Journal Article: >>>>>>>>>>>> http://hdl.handle.net/10380/3186 >>>>>>>>>>>> >> >> * AnisotropicDiffusionLBR >>>>>>>>>>>> >> >> * Insight Journal Article: >>>>>>>>>>>> http://hdl.handle.net/10380/3505 >>>>>>>>>>>> >> >> * Web browser reproducibility: >>>>>>>>>>>> >> >> http://www.kitware.com/blog/home/post/942 >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Core Improvements >>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^ >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> * External Modules can now be developed outside of the >>>>>>>>>>>> ITK source tree >>>>>>>>>>>> >> >> and >>>>>>>>>>>> >> >> on GitHub >>>>>>>>>>>> >> >> * Details: http://www.kitware.com/blog/home/post/997 >>>>>>>>>>>> >> >> * New utilities in itk::Math: >>>>>>>>>>>> >> >> * AlmostEquals >>>>>>>>>>>> >> >> * NotAlmostEquals >>>>>>>>>>>> >> >> * ExactlyEquals >>>>>>>>>>>> >> >> * NotExactlyEquals >>>>>>>>>>>> >> >> * New itk::NumericTraits >>>>>>>>>>>> >> >> * IsInteger >>>>>>>>>>>> >> >> * IsSigned >>>>>>>>>>>> >> >> * Improved C++11 support >>>>>>>>>>>> >> >> * New ITK_DELETE_FUNCTION macro for “=delete” >>>>>>>>>>>> >> >> * New ITK_NOEXCEPT macro for the “noexcept” keyword >>>>>>>>>>>> >> >> * Improved capabilities of itk::ResourceProbe and >>>>>>>>>>>> >> >> itk::ResourceProbesCollectorBase >>>>>>>>>>>> >> >> * Improve numerical stability in VNL eigen system >>>>>>>>>>>> estimation >>>>>>>>>>>> >> >> * itksys_ios:: and itksys_stl:: have been remove (use >>>>>>>>>>>> std::) >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Filtering Improvements >>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^ >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> * Generate a FlatStructuringElement from an image >>>>>>>>>>>> >> >> * WarpImageFilter support VectorImage’s >>>>>>>>>>>> >> >> * ConvertLabelMap supports different LabelMap types >>>>>>>>>>>> >> >> * ImageToPathFilter moved from the ITKReview to the >>>>>>>>>>>> ITKPath module >>>>>>>>>>>> >> >> * itk::MovingHistogramImageFilter moved to the >>>>>>>>>>>> ITKImageFilterBase >>>>>>>>>>>> >> >> module >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Registration Improvements >>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> * Point-set registration with time-varying B-splines >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Build Improvements >>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^ >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> * Module dependencies can now be specified as public / >>>>>>>>>>>> private / >>>>>>>>>>>> >> >> compile / >>>>>>>>>>>> >> >> test >>>>>>>>>>>> >> >> * BUILD_EXAMPLES CMake option is now OFF by default >>>>>>>>>>>> >> >> * Option to export all library symbols on Windows: >>>>>>>>>>>> >> >> * Details: http://www.kitware.com/blog/home/post/939 >>>>>>>>>>>> >> >> * Expat third party library is now name mangled >>>>>>>>>>>> >> >> * Many more modules can be built as shared libraries >>>>>>>>>>>> >> >> * KWStyle is automatically built and configured when >>>>>>>>>>>> tests are built >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Performance Improvements >>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> * New MetaProgrammingLibrary namespace (itk::mpl) holds >>>>>>>>>>>> members for >>>>>>>>>>>> >> >> metaprogramming >>>>>>>>>>>> >> >> * itk::mpl::{TrueType,FalseType} >>>>>>>>>>>> >> >> * itk::mpl::{If,Not,And,Or,Xor} >>>>>>>>>>>> >> >> * itk::mpl::EnableIf >>>>>>>>>>>> >> >> * itk::mpl::IsBaseOf >>>>>>>>>>>> >> >> * itk::mpl::IsConvertible >>>>>>>>>>>> >> >> * itk::mpl::IsNumber >>>>>>>>>>>> >> >> * itk::mpl::IsSame >>>>>>>>>>>> >> >> * itk::mpl::PromoteType >>>>>>>>>>>> >> >> * Image::GetPixel performance improvements >>>>>>>>>>>> >> >> * Many itk::VariableLengthVector performance improvements >>>>>>>>>>>> >> >> * AdaptiveHistogramEqualization uses a moving histogram >>>>>>>>>>>> >> >> * WarpImageFilter performance improvements >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Documentation Improvements >>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> * Updates to the Software Guide, Doxygen, Wiki and Sphinx >>>>>>>>>>>> Examples >>>>>>>>>>>> >> >> * ITK Software Guide improvements >>>>>>>>>>>> >> >> * How to use Python wrapping >>>>>>>>>>>> >> >> * How to create an ITK module >>>>>>>>>>>> >> >> * Improvements to segmentation examples >>>>>>>>>>>> >> >> * Expanded Canny edge detection example >>>>>>>>>>>> >> >> * Expanded tree container example >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Third Party Library Updates >>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> * FFTW updated to latest upstream >>>>>>>>>>>> >> >> * Build with recent OpenCV 2 and 3 >>>>>>>>>>>> >> >> * Build with the latest VTK >>>>>>>>>>>> >> >> * PNG update to the latest upstream >>>>>>>>>>>> >> >> * GDCM updated to the latest upstream >>>>>>>>>>>> >> >> * KWSys updated to the latest upstream >>>>>>>>>>>> >> >> * MINC updated to the latest upstream >>>>>>>>>>>> >> >> * SWIG updated to the latest upstream >>>>>>>>>>>> >> >> * Third party PNG and MINC are now Git subtrees >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Style improvements -- ITK gets more stylish with every >>>>>>>>>>>> release! >>>>>>>>>>>> >> >> >>>>>>>>>>>> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> * Private copy constructors and operator= use >>>>>>>>>>>> ITK_DELETE_FUNCTION >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Improved code coverage -- we are at 84.9%! >>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> * *Lots* of important bug fixes >>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> * And much more! See details in the log below. >>>>>>>>>>>> >> >> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Changes from v4.8.0..v4.9rc01 >>>>>>>>>>>> >> >> -------------------------------------------- >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Abhishek Tiwari (1): >>>>>>>>>>>> >> >> BUG: "tmpImageIndex" not initialized to 0. >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Adam Snyder (1): >>>>>>>>>>>> >> >> PERF: Reworked MMI Threading using a per-thread >>>>>>>>>>>> buffer >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Alexander Leinoff (6): >>>>>>>>>>>> >> >> ENH: Adds IsInteger and IsSigned to NumericTraits. >>>>>>>>>>>> >> >> COMP: Doxygen itkMath.h 'OneValue()' could not be >>>>>>>>>>>> resolved. >>>>>>>>>>>> >> >> ENH: Adds ExactlyEquals and NotExactlyEquals >>>>>>>>>>>> functions to >>>>>>>>>>>> >> >> itkMath.h >>>>>>>>>>>> >> >> COMP: Removes floating-point equality checks >>>>>>>>>>>> >> >> ENH: COMP: Adds support for complex values to >>>>>>>>>>>> Math::AlmostEquals >>>>>>>>>>>> >> >> ENH: Updates fftw dependency >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Arnaud Gelas (5): >>>>>>>>>>>> >> >> COMP: fix warning (unused local typedef) >>>>>>>>>>>> >> >> COMP: simplify ITKVideoBridgeOpenCV dependency >>>>>>>>>>>> >> >> DOC: add doxgen documentation for >>>>>>>>>>>> >> >> BinaryImageToLevelSetImageAdaptor >>>>>>>>>>>> >> >> ENH: add tests to exercise >>>>>>>>>>>> itk::ThreadedIteratorRangePartitioner >>>>>>>>>>>> >> >> COMP: fix compilation error with OpenCV2 and OpenCV3 >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Betsy McPhail (1): >>>>>>>>>>>> >> >> BUG: Improve buffer alignment in OctreeNode . >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Bill Hoffman (2): >>>>>>>>>>>> >> >> ENH: Use new CMake Windows export symbol dll feature. >>>>>>>>>>>> >> >> COMP: Put vnl_export.h in the list of sources so it >>>>>>>>>>>> gets >>>>>>>>>>>> >> >> installed. >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Bill Lorensen (4): >>>>>>>>>>>> >> >> COMP: VTkGlue linker errors >>>>>>>>>>>> >> >> BUG: Inappropriate use of AlmostEquals >>>>>>>>>>>> >> >> ENH: Bump tag for wiki examples >>>>>>>>>>>> >> >> ENH: Better layout strategy >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Brad King (3): >>>>>>>>>>>> >> >> ENH: Remove use of include <itksys/ios/*> and >>>>>>>>>>>> itksys_ios::* >>>>>>>>>>>> >> >> ENH: Remove use of include <itksys/stl/*> and >>>>>>>>>>>> itksys_stl::* >>>>>>>>>>>> >> >> ENH: Update CMake Policy settings in >>>>>>>>>>>> Testing/TestExternal project >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Bradley Lowekamp (31): >>>>>>>>>>>> >> >> BUG: Avoid null deference in PrintSelf with default >>>>>>>>>>>> construction >>>>>>>>>>>> >> >> ENH: Enable base classes for templates of landmark >>>>>>>>>>>> initializer >>>>>>>>>>>> >> >> STYLE: Use "Swap" for ITK member name >>>>>>>>>>>> >> >> BUG: Demonstrate Eigen analysis failure >>>>>>>>>>>> >> >> BUG: Fix computation of Eigen analysis >>>>>>>>>>>> >> >> ENH: Update DiscreteHessianGaussian Test baseline >>>>>>>>>>>> >> >> ENH: Correctly demonstrate float point Eigen failure >>>>>>>>>>>> >> >> ENH: compile vnl_math_hypot, and use at least double >>>>>>>>>>>> >> >> ENH: Adding initial update script from used libpng >>>>>>>>>>>> version. >>>>>>>>>>>> >> >> ENH: removing non-subtree files for itkpng >>>>>>>>>>>> >> >> ENH: Ported ITK changes for building to subtree >>>>>>>>>>>> merged code >>>>>>>>>>>> >> >> ENH: Update libpng update script for v1.6.9 >>>>>>>>>>>> >> >> BUG: Use ParameterValueType for computation of >>>>>>>>>>>> landmark affine >>>>>>>>>>>> >> >> ENH: Wrap LandmarkBasedTransformInitializer >>>>>>>>>>>> >> >> BUG: Avoid potential exception in >>>>>>>>>>>> itk::Object::UnRegister >>>>>>>>>>>> >> >> ENH: Update itkpng zlib, configuration, and rename >>>>>>>>>>>> >> >> ENH: Update itkpng name mangling >>>>>>>>>>>> >> >> BUG: Use const pointer in Set method for constant >>>>>>>>>>>> ReferenceImage >>>>>>>>>>>> >> >> ivar >>>>>>>>>>>> >> >> BUG: Increase tolerance for >>>>>>>>>>>> PhysicsBasedNonRigidRegistrationMethod >>>>>>>>>>>> >> >> BUG: Demonstrate side effect on registration due to >>>>>>>>>>>> BSplineScatter >>>>>>>>>>>> >> >> change >>>>>>>>>>>> >> >> ENH: Move MovingHistogramImageFilter base classes to >>>>>>>>>>>> >> >> ImageFilterBase >>>>>>>>>>>> >> >> BUG: Avoid potential exception in >>>>>>>>>>>> itk::Object::UnRegister >>>>>>>>>>>> >> >> BUG: Avoid null deference in PrintSelf with default >>>>>>>>>>>> construction >>>>>>>>>>>> >> >> BUG: Use const pointer in Set method for constant >>>>>>>>>>>> ReferenceImage >>>>>>>>>>>> >> >> ivar >>>>>>>>>>>> >> >> ENH: Optimize AdaptiveHistogramEqualization with >>>>>>>>>>>> MovingHistogram >>>>>>>>>>>> >> >> base >>>>>>>>>>>> >> >> COMP: address sign unsigned comparison warning >>>>>>>>>>>> >> >> COMP: Address signed unsigned comparison warning >>>>>>>>>>>> >> >> COMP: Address unused member variable and methods in >>>>>>>>>>>> anonymous ns >>>>>>>>>>>> >> >> BUG: Fix segfault when with empty IsolatedWatershed >>>>>>>>>>>> Threshold >>>>>>>>>>>> >> >> range >>>>>>>>>>>> >> >> BUG: Adjust intensity tolerance for >>>>>>>>>>>> PhysicsBasedNonRigid test >>>>>>>>>>>> >> >> BUG: Reduce number of targets with MSVC >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Davis Vigneault (7): >>>>>>>>>>>> >> >> DOC: Minor improvements to segmentation examples. >>>>>>>>>>>> >> >> DOC: Expanded Canny Edge Detection Example >>>>>>>>>>>> >> >> DOC: Expanded TreeContainer Example >>>>>>>>>>>> >> >> COMP: Warnings in itkVTKImageExport when compiling >>>>>>>>>>>> with c++11 >>>>>>>>>>>> >> >> COMP: Warnings in FFTW Classes when compiling with >>>>>>>>>>>> c++11 >>>>>>>>>>>> >> >> COMP: Update Git Tag for Subdivision Module >>>>>>>>>>>> >> >> COMP: Warnings in FFTW Classes when compiling with >>>>>>>>>>>> c++11 >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Dženan Zukić (1): >>>>>>>>>>>> >> >> STYLE: better formatting of the "usage" message >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Eugene Prilepin (1): >>>>>>>>>>>> >> >> BUG: Fix a template name formation in python >>>>>>>>>>>> wrappings >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Floris Berendsen (1): >>>>>>>>>>>> >> >> STYLE: Improve naming conventions in comments. >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Hans Johnson (29): >>>>>>>>>>>> >> >> STYLE: Instrument for FixedParameters typedef >>>>>>>>>>>> >> >> BUG: Demonstrate DisplacementTransformFailure >>>>>>>>>>>> >> >> BUG: FixedParameters should be double precision >>>>>>>>>>>> >> >> STYLE: Minor code style issues for MGHIO >>>>>>>>>>>> >> >> COMP: Update to version for WikiExamples >>>>>>>>>>>> >> >> ENH: Update Sphinx for ITK 4.8.0 >>>>>>>>>>>> >> >> ENH: Update MGHIO to be shared lib >>>>>>>>>>>> >> >> ENH: Provide consistent floating point comparisons >>>>>>>>>>>> >> >> BUG: Fix MGHIO to fix write failures >>>>>>>>>>>> >> >> PERF: Remove floating point as sentinal value >>>>>>>>>>>> >> >> COMP: Const correctness needs to be maintained >>>>>>>>>>>> >> >> BUG: Preserve backwards compatibility >>>>>>>>>>>> >> >> DOC: Provide consistent naming in comments >>>>>>>>>>>> >> >> ENH: Conversion between transform type tolerance >>>>>>>>>>>> >> >> STYLE: Prefer initialization to assignment >>>>>>>>>>>> >> >> ENH: Missing ITK_OVERRIDE >>>>>>>>>>>> >> >> COMP: Need to propagate ITKGDCM >>>>>>>>>>>> >> >> COMP: Need to propagate ITKGDCM >>>>>>>>>>>> >> >> COMP: Add missing ITK_OVERRIDE >>>>>>>>>>>> >> >> STYLE: Minor code style issues for MGHIO >>>>>>>>>>>> >> >> COMP: Update to version for WikiExamples >>>>>>>>>>>> >> >> ENH: Update Sphinx for ITK 4.8.0 >>>>>>>>>>>> >> >> ENH: Update MGHIO to be shared lib >>>>>>>>>>>> >> >> BUG: Fix MGHIO to fix write failures >>>>>>>>>>>> >> >> ENH: C++11 allows for rigorous =delete >>>>>>>>>>>> >> >> COMP: Remove unnecessary failing assert test >>>>>>>>>>>> >> >> ENH: Ignore internal files for the Clion editor >>>>>>>>>>>> >> >> COMP: Fix VNL compilation for wider C++11 support >>>>>>>>>>>> >> >> BUG: In configuration test need to mirror code >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Hyun Jae Kang (27): >>>>>>>>>>>> >> >> BUG: Remove std::cout calls from class >>>>>>>>>>>> >> >> BUG: Avoid an unexpected output of static_cast >>>>>>>>>>>> >> >> BUG: Update python example codes for >>>>>>>>>>>> ImageRegistration >>>>>>>>>>>> >> >> BUG: Retrieve the missed wrap file >>>>>>>>>>>> >> >> BUG: itkVTKImageIO class does not handle blank lines >>>>>>>>>>>> in VTK file >>>>>>>>>>>> >> >> header. >>>>>>>>>>>> >> >> BUG: Fix HDF5 CMake configuration with VS2015 >>>>>>>>>>>> >> >> BUG: Fix a compilation issue on ITK4 with FFTW and >>>>>>>>>>>> shared >>>>>>>>>>>> >> >> libraries >>>>>>>>>>>> >> >> BUG: Fixed older XCode linking error >>>>>>>>>>>> >> >> ENH: Use CastXML binaries when building with x86_64 >>>>>>>>>>>> Mac OS X >>>>>>>>>>>> >> >> BUG: Remove std::cout calls from class >>>>>>>>>>>> >> >> BUG: itkVTKImageIO class does not handle blank lines >>>>>>>>>>>> in VTK file >>>>>>>>>>>> >> >> header. >>>>>>>>>>>> >> >> BUG: Fixed older XCode linking error >>>>>>>>>>>> >> >> ENH: Add automatic KWStyle build and configuration >>>>>>>>>>>> setup >>>>>>>>>>>> >> >> COMP: KWStyle shadow, format-nonliteral and >>>>>>>>>>>> autological-compare >>>>>>>>>>>> >> >> warning. >>>>>>>>>>>> >> >> COMP: Fixed the warning messages from itkGPU Module >>>>>>>>>>>> >> >> COMP: Fixed a warning message of unused-private-field >>>>>>>>>>>> >> >> COMP: Apply latest version of KWStyle >>>>>>>>>>>> >> >> COMP: Update KWStyle to fix its additional warning >>>>>>>>>>>> messages >>>>>>>>>>>> >> >> COMP: Update KWStyle to fix its additional warning >>>>>>>>>>>> messages >>>>>>>>>>>> >> >> COMP: Fix data-conversion warning messages on Windows >>>>>>>>>>>> >> >> ENH: Update itkResourceProbe to calculate >>>>>>>>>>>> statistical data >>>>>>>>>>>> >> >> COMP: Fix data-conversion warning messages on VS14 >>>>>>>>>>>> >> >> COMP: Fixed 'std::sqrt' : ambiguous call to >>>>>>>>>>>> overloaded function >>>>>>>>>>>> >> >> ENH: Update the Report() function of >>>>>>>>>>>> >> >> itkResourceProbesCollectorBase >>>>>>>>>>>> >> >> COMP: Fix data-conversion warning message on >>>>>>>>>>>> itkResourceProbe >>>>>>>>>>>> >> >> COMP: Fix additional warning messages of KWStyle >>>>>>>>>>>> >> >> COMP: Fix data-conversion warning messages >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Jon Haitz Legarreta (6): >>>>>>>>>>>> >> >> ENH: Add test for itkStatisticsUniqueLabelMapFilter >>>>>>>>>>>> >> >> BUG: Fix compilation issues for >>>>>>>>>>>> StatisticsUniqueLabelMapFilterTest >>>>>>>>>>>> >> >> BUG: Fix comparison issues for >>>>>>>>>>>> itkStatisticsUniqueLabelMapFilter >>>>>>>>>>>> >> >> BUG: Test for StatisticsUniqueLabelMapFilter >>>>>>>>>>>> stability >>>>>>>>>>>> >> >> ENH: Add test for >>>>>>>>>>>> itkParametricStpaceToImageSpaceFilter >>>>>>>>>>>> >> >> ENH: Improve code coverage for >>>>>>>>>>>> >> >> itkParametricSpaceToImageSpaceMeshFilter >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Julien Michel (1): >>>>>>>>>>>> >> >> ENH: Support of VectorImage as template parameters >>>>>>>>>>>> for >>>>>>>>>>>> >> >> WarpImageFilter >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Junjie Bai (2): >>>>>>>>>>>> >> >> BUG: ConvertLabelMap with different LabelMapTypes >>>>>>>>>>>> >> >> BUG: LabelObject CopyAttribute support different >>>>>>>>>>>> LabelObject type >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> KWSys Robot (4): >>>>>>>>>>>> >> >> KWSys 2015-07-10 (c9336bcf) >>>>>>>>>>>> >> >> KWSys 2015-07-30 (f63febb7) >>>>>>>>>>>> >> >> KWSys 2015-08-24 (cdaf522c) >>>>>>>>>>>> >> >> KWSys 2015-08-28 (dc3fdd7f) >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> LIBPNG Upstream (2): >>>>>>>>>>>> >> >> PNG 2009-04-06 (e68f5a36) >>>>>>>>>>>> >> >> PNG 2014-02-05 (3e753eb8) >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Laurentiu Nicola (2): >>>>>>>>>>>> >> >> PERF: Avoid temporary smartptr in >>>>>>>>>>>> ProcessObject::GetInput >>>>>>>>>>>> >> >> PERF: Optimize WarpImageFilter by avoiding refcount >>>>>>>>>>>> bouncing >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Luc Hermitte (8): >>>>>>>>>>>> >> >> PERF: itk::Image::GetPixel() performance improvment. >>>>>>>>>>>> >> >> PERF: Performance enhancements on >>>>>>>>>>>> VariableLengthVectors 1/... >>>>>>>>>>>> >> >> ENH: Dependencies on itkVariableLengthVector.h >>>>>>>>>>>> reduced >>>>>>>>>>>> >> >> BUG: Error in VariableLengthVector Unit Tests >>>>>>>>>>>> >> >> PERF: Performance enhancements on VLV 2/... >>>>>>>>>>>> >> >> PERF: Performances enhancements on VLV 3/... >>>>>>>>>>>> >> >> COMP: Fix signed/unsigned warnings >>>>>>>>>>>> >> >> BUG: std::copy/fill on empty VLV >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Lucas Gandel (4): >>>>>>>>>>>> >> >> ENH: Move ImageToPathFilter from ITKReview to >>>>>>>>>>>> ITKPath module. >>>>>>>>>>>> >> >> BUG: Fixing ImageToPathFilter wrapping call from >>>>>>>>>>>> Review Module >>>>>>>>>>>> >> >> STYLE: Fix KWStyle dashboard errors >>>>>>>>>>>> >> >> BUG: Fix external module BUILD_SHARED_LIBS status >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Mathieu Malaterre (1): >>>>>>>>>>>> >> >> BUG: Name mangle the included expat third party >>>>>>>>>>>> library. >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Matthew McCormick (94): >>>>>>>>>>>> >> >> ENH: Change itkSystemInformationTest to >>>>>>>>>>>> itkCMakeConfigurationTest. >>>>>>>>>>>> >> >> ENH: Add AnisotropicDiffusionLBR Remote Module. >>>>>>>>>>>> >> >> ENH: Bump ITK version to 4.9.0. >>>>>>>>>>>> >> >> BUG: Remove std::cout calls from classes. >>>>>>>>>>>> >> >> COMP: Remove unused argument in >>>>>>>>>>>> ConditionVariableNoThreads. >>>>>>>>>>>> >> >> BUG: Implement UpdateLargestPossibleRegion for >>>>>>>>>>>> >> >> ImageToVTKImageFilter. >>>>>>>>>>>> >> >> COMP: Add link interface specification for wrapping >>>>>>>>>>>> >> >> target_link_libraries. >>>>>>>>>>>> >> >> STYLE: Fix indentation in >>>>>>>>>>>> itkMINCTransformIOFactory.cxx. >>>>>>>>>>>> >> >> COMP: Fix MINCTransformIO factory registration. >>>>>>>>>>>> >> >> COMP: Add -D_LARGEFILE64_SOURCE for HDF5 with >>>>>>>>>>>> Emscripten-1. >>>>>>>>>>>> >> >> COMP: Remove unknown doxygen command in >>>>>>>>>>>> AnisotropicDiffusionLBR. >>>>>>>>>>>> >> >> BUG: Initialize mutex for 32 bit AtomicInt. >>>>>>>>>>>> >> >> ENH: Use CastXML binaries when building with x86_64 >>>>>>>>>>>> Linux. >>>>>>>>>>>> >> >> STYLE: Rename gccxml -> castxml in >>>>>>>>>>>> {idx,igenerator}.py. >>>>>>>>>>>> >> >> COMP: Disable the gold linker for static builds on >>>>>>>>>>>> Ubuntu 14.04. >>>>>>>>>>>> >> >> ENH: Use Windows binaries for CastXML. >>>>>>>>>>>> >> >> ENH: Add better scoping in igenerator.py. >>>>>>>>>>>> >> >> BUG: Fix CMAKE_BUILD_TYPE initialization with Ninja >>>>>>>>>>>> + MSVC. >>>>>>>>>>>> >> >> BUG: LevelSetsv4 used signed char instead of char. >>>>>>>>>>>> >> >> ENH: Add better scoping to idx.py. >>>>>>>>>>>> >> >> COMP: Define newSize and oldSize in >>>>>>>>>>>> VariableLengthVector. >>>>>>>>>>>> >> >> STYLE: Use prefix increment operator in ImageBase. >>>>>>>>>>>> >> >> DOC: Correct spelling of Continuous. >>>>>>>>>>>> >> >> ENH: Add more progress information to >>>>>>>>>>>> IterativeClosestPoint2. >>>>>>>>>>>> >> >> BUG: Build BridgeNumPy with Visual Studio. >>>>>>>>>>>> >> >> ENH: Add ITKModuleExternal.cmake >>>>>>>>>>>> >> >> COMP: Wrap Image< bool, D > for >>>>>>>>>>>> FlatStructuringElement. >>>>>>>>>>>> >> >> BUG: Use CastXML binary built in Release. >>>>>>>>>>>> >> >> BUG: ContinuousIndex should not be templated over >>>>>>>>>>>> TCoordRep. >>>>>>>>>>>> >> >> COMP: Set CMP0054 to new. >>>>>>>>>>>> >> >> COMP: Address line length too long for Software >>>>>>>>>>>> Guide. >>>>>>>>>>>> >> >> COMP: Fix CannyEdgeDetectionImageFilter.cxx types. >>>>>>>>>>>> >> >> BUG: Support Python 3 wrapping module initialization. >>>>>>>>>>>> >> >> BUG: Update itkTemplate.py for Python 3. >>>>>>>>>>>> >> >> BUG: Update itkExtras.py for Python 3. >>>>>>>>>>>> >> >> BUG: Prevent Python callback addition recursion. >>>>>>>>>>>> >> >> BUG: Fix test scripts for Python 3. >>>>>>>>>>>> >> >> BUG: Replace __GCCXML__ with CABLE_CONFIGURATION. >>>>>>>>>>>> >> >> ENH: Allow projects to build against an external >>>>>>>>>>>> module. >>>>>>>>>>>> >> >> ENH: Replace CABLE_CONFIGURATION with >>>>>>>>>>>> ITK_WRAPPING_PARSER. >>>>>>>>>>>> >> >> ENH: Rename _cable_ to _wrappers_. >>>>>>>>>>>> >> >> BUG: Replace __GCCXML__ with CABLE_CONFIGURATION. >>>>>>>>>>>> >> >> BUG: Define ITK_WRAPPING_PARSER when wrapping. >>>>>>>>>>>> >> >> COMP: Do not use C++11 alignas in itkAlignedTypedef. >>>>>>>>>>>> >> >> ENH: Bump CMakeLists.txt version to 4.8.1. >>>>>>>>>>>> >> >> BUG: Pass the CMAKE_CXX_FLAGS to castxml. >>>>>>>>>>>> >> >> ENH: Bump CastXML version to 2015-30-29. >>>>>>>>>>>> >> >> ENH: Bump LLVM / Clang to 3.7.0. >>>>>>>>>>>> >> >> COMP: Avoid itklibminc linking with >>>>>>>>>>>> ITK_USE_SYSTEM_HDF5. >>>>>>>>>>>> >> >> COMP: Add missing ITKIOImageBase dependency for >>>>>>>>>>>> ITKTransformMINC. >>>>>>>>>>>> >> >> COMP: Use itkSimpleNewMacro in >>>>>>>>>>>> >> >> ThreadedIteratorRangePartitionerTest. >>>>>>>>>>>> >> >> ENH: Add wrapping support for building modules >>>>>>>>>>>> externally. >>>>>>>>>>>> >> >> BUG: Fix KWStyle test paths when building a module >>>>>>>>>>>> externally. >>>>>>>>>>>> >> >> ENH: Add Cuberille Remote module. >>>>>>>>>>>> >> >> COMP: Remove carriage returns from Cuberille remote. >>>>>>>>>>>> >> >> COMP: Remove unused argument in >>>>>>>>>>>> ConditionVariableNoThreads. >>>>>>>>>>>> >> >> DOC: Correct spelling of Continuous. >>>>>>>>>>>> >> >> ENH: Bump the MinimalPathExtraction Remote to >>>>>>>>>>>> 2015-10-20. >>>>>>>>>>>> >> >> COMP: Fix KernelTransform SetFixedParameters >>>>>>>>>>>> argument type. >>>>>>>>>>>> >> >> STYLE: Use prefix increment operator in ImageBase. >>>>>>>>>>>> >> >> COMP: Use ITK's pygccxml by correctly setting up the >>>>>>>>>>>> sys.path >>>>>>>>>>>> >> >> Revert "COMP: Put vnl_export.h in the list of >>>>>>>>>>>> sources so it gets >>>>>>>>>>>> >> >> installed." >>>>>>>>>>>> >> >> BUG: Revert "BUG: ConvertLabelMap with different >>>>>>>>>>>> LabelMapTypes" >>>>>>>>>>>> >> >> ENH: Marking wrapping CMake configuration variables >>>>>>>>>>>> as advanced. >>>>>>>>>>>> >> >> STYLE: Rename CASTXML to CASTXML_EXECUTABLE. >>>>>>>>>>>> >> >> COMP: Non-virtual copy attribute members in LabelMap >>>>>>>>>>>> cannot have >>>>>>>>>>>> >> >> override. >>>>>>>>>>>> >> >> COMP: Add wrapping for >>>>>>>>>>>> AdaptiveHistogramEqualizationImageFilter. >>>>>>>>>>>> >> >> COMP: Add itkMacro.h to itkPromoteType.h for >>>>>>>>>>>> ITK_EXCEPT. >>>>>>>>>>>> >> >> ENH: Remove CMake version check in >>>>>>>>>>>> ITKModuleHeaderTest.cmake >>>>>>>>>>>> >> >> BUG: Improve KWStyle ExternalProject utilization. >>>>>>>>>>>> >> >> ENH: Remove old KWStyle build script. >>>>>>>>>>>> >> >> COMP: Address VariableLengthVector Doxygen rhs >>>>>>>>>>>> @param not found. >>>>>>>>>>>> >> >> ENH: Rename WRAPPING_LIBRARY_GROUPS to >>>>>>>>>>>> WRAPPING_SUBMODULE_ORDER. >>>>>>>>>>>> >> >> ENH: Install Python bindings into site-packages. >>>>>>>>>>>> >> >> ENH: Improve readability of Python site-packages >>>>>>>>>>>> path detection. >>>>>>>>>>>> >> >> COMP: DiscreteGaussianDerivativeImageFilter unsigned >>>>>>>>>>>> expression >>>>>>>>>>>> >> >> warning. >>>>>>>>>>>> >> >> BUG: ITKCommon publically depends on >>>>>>>>>>>> ITKDoubleConversion. >>>>>>>>>>>> >> >> COMP: Improve scoping in CovariantVectorGeometryTest. >>>>>>>>>>>> >> >> ENH: Improves names and export of module >>>>>>>>>>>> dependencies. >>>>>>>>>>>> >> >> STYLE: Improve namespace bracket style in >>>>>>>>>>>> itkIsConvertible. >>>>>>>>>>>> >> >> COMP: Set CMP0054 to new. >>>>>>>>>>>> >> >> BUG: Remove unused wrapping files. >>>>>>>>>>>> >> >> BUG: Do install install wrapping development files. >>>>>>>>>>>> >> >> ENH: Add WRAP_ITK_INSTALL_COMPONENT_IDENTIFIER. >>>>>>>>>>>> >> >> BUG: Remove duplicate inclusion of wrapping >>>>>>>>>>>> submodules. >>>>>>>>>>>> >> >> COMP: Do not use C++ style comments for Doxygen cond. >>>>>>>>>>>> >> >> BUG: Fix detection of the gold linker. >>>>>>>>>>>> >> >> BUG: Update Python package installation locations. >>>>>>>>>>>> >> >> ENH: Bump CMakeLists.txt version to 4.8.2. >>>>>>>>>>>> >> >> ENH: Change BUILD_EXAMPLES default to OFF. >>>>>>>>>>>> >> >> BUG: Use 'from itk import ITKCommon' in >>>>>>>>>>>> module2module test. >>>>>>>>>>>> >> >> COMP: Link to VTK Python when built with Kits >>>>>>>>>>>> support. >>>>>>>>>>>> >> >> BUG: Install itk_minc2.h header. >>>>>>>>>>>> >> >> COMP: ITKIOMINC has a public dependency on >>>>>>>>>>>> ITKIOImageBase. >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Michka Popoff (9): >>>>>>>>>>>> >> >> ENH: Update to swig 3.0.7 >>>>>>>>>>>> >> >> ENH: Do not link against specific Python library on >>>>>>>>>>>> OS X >>>>>>>>>>>> >> >> COMP: Fix wrapping warnings when building with >>>>>>>>>>>> >> >> ITK_WRAP_IMAGE_DIMS=2 >>>>>>>>>>>> >> >> COMP: Add missing wrapping for TransformBase >>>>>>>>>>>> >> >> COMP: Use ITK's pygccxml by correctly setting up the >>>>>>>>>>>> sys.path >>>>>>>>>>>> >> >> COMP: Disable incompatible modules when using Python >>>>>>>>>>>> 3 wrapping >>>>>>>>>>>> >> >> COMP: Move MovingHistogramImageFilterBase wrapping to >>>>>>>>>>>> >> >> ImageFilterBase >>>>>>>>>>>> >> >> module >>>>>>>>>>>> >> >> COMP: Disable incompatible modules when using Python >>>>>>>>>>>> 3 wrapping >>>>>>>>>>>> >> >> ENH: Allow operations on Indexes and Offsets in >>>>>>>>>>>> Python >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Mikhail Isakov (1): >>>>>>>>>>>> >> >> BUG: DiffusionTensor3DReconstruction segfault if no >>>>>>>>>>>> baseline image >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Nick Tustison (5): >>>>>>>>>>>> >> >> BUG: Set a default b-spline epsilon. >>>>>>>>>>>> >> >> ENH: Adding testing for closed loop. >>>>>>>>>>>> >> >> BUG: Updating B-spline classes with the same >>>>>>>>>>>> epsilon strategy. >>>>>>>>>>>> >> >> PERF: Switch vnl_vectors for fixed arrays. >>>>>>>>>>>> >> >> ENH: Point-set registration with time-varying >>>>>>>>>>>> B-spline. >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Olivier Commowick (3): >>>>>>>>>>>> >> >> BUG: Correct discrepancy in tridiagonal reduction >>>>>>>>>>>> wrt VNL eigen >>>>>>>>>>>> >> >> system >>>>>>>>>>>> >> >> BUG: Correct under/overflows in vnl_math_hypot >>>>>>>>>>>> (taken from pythag >>>>>>>>>>>> >> >> from V3P) >>>>>>>>>>>> >> >> BUG: Switch eigenvalues computation to double >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Pablo Hernandez-Cerdan (2): >>>>>>>>>>>> >> >> ENH: Help class for itkFlatStructuringElement with >>>>>>>>>>>> constructor >>>>>>>>>>>> >> >> from >>>>>>>>>>>> >> >> images. >>>>>>>>>>>> >> >> COMP: Fix test errors and warnings in >>>>>>>>>>>> FlatStructuringElement. >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Seun Odutola (1): >>>>>>>>>>>> >> >> COMP: Fixed name clash with Apple header (check >>>>>>>>>>>> Macro), renamed >>>>>>>>>>>> >> >> check >>>>>>>>>>>> >> >> to Check >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Shawn Waldon (1): >>>>>>>>>>>> >> >> COMP: Set target OS X version in environment for >>>>>>>>>>>> tools using >>>>>>>>>>>> >> >> compiler >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Simon Alexander (1): >>>>>>>>>>>> >> >> BUG: incorrect closest point computation >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Tobias Wood (2): >>>>>>>>>>>> >> >> BUG: LBFGSB was printing messages even with debug >>>>>>>>>>>> switched off. >>>>>>>>>>>> >> >> BUG: Removed an unguarded print statement. >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Vladimir S. FONOV (9): >>>>>>>>>>>> >> >> BUG: Missing ITKIOMINC_EXPORT on __Private() >>>>>>>>>>>> >> >> COMP: Changing the order of HDF5 library components >>>>>>>>>>>> >> >> COMP: Splitting up IOMINC module into two parts: >>>>>>>>>>>> MINC and >>>>>>>>>>>> >> >> Transform >>>>>>>>>>>> >> >> STYLE: updated comments to properly reference LIBMINC >>>>>>>>>>>> >> >> ENH: Add script to merge upstream MINC as a subtree >>>>>>>>>>>> >> >> MINC 2015-07-23 (c033d431) >>>>>>>>>>>> >> >> COMP: Update MINC CMake code >>>>>>>>>>>> >> >> MINC 2015-08-18 (6d7e3ba8) >>>>>>>>>>>> >> >> MINC 2015-09-13 (95cd5374) >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Xiaoxiao Liu (1): >>>>>>>>>>>> >> >> DOC: update email address for xiaoxiao. >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Zach Williamson (10): >>>>>>>>>>>> >> >> BUG: Use correct libraries for ImageFusion tests >>>>>>>>>>>> >> >> ENH: Consolidate Library Dependencies >>>>>>>>>>>> >> >> COMP: Add a missing link to Review module >>>>>>>>>>>> >> >> COMP: Use correct linking macro in DCMTK >>>>>>>>>>>> >> >> BUG: Use correct libraries for TestKernel tests >>>>>>>>>>>> >> >> COMP: Fix inconsistant naming of >>>>>>>>>>>> GPUPDEDeformableRegistration >>>>>>>>>>>> >> >> ENH: Use new linking system macros >>>>>>>>>>>> >> >> PERF: Avoid searching private dependencies for >>>>>>>>>>>> include directories >>>>>>>>>>>> >> >> COMP: Recover missing dependencies >>>>>>>>>>>> >> >> ENH: use new linking macros in Filtering module >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> ----------------------------------------------------- >>>>>>>>>>>> >> >> Errors or omissions? Please fix them here: >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> >>>>>>>>>>>> https://docs.google.com/document/d/1j3IAZFfi0ToO8N6hTr0fVTTMmHIMkXAxx0AsAajsYuM/edit >>>>>>>>>>>> >> >> _____________________________________ >>>>>>>>>>>> >> >> Powered by www.kitware.com >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Visit other Kitware open-source projects at >>>>>>>>>>>> >> >> http://www.kitware.com/opensource/opensource.html >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Kitware offers ITK Training Courses, for more information >>>>>>>>>>>> visit: >>>>>>>>>>>> >> >> http://www.kitware.com/products/protraining.php >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Please keep messages on-topic and check the ITK FAQ at: >>>>>>>>>>>> >> >> http://www.itk.org/Wiki/ITK_FAQ >>>>>>>>>>>> >> >> >>>>>>>>>>>> >> >> Follow this link to subscribe/unsubscribe: >>>>>>>>>>>> >> >> http://public.kitware.com/mailman/listinfo/insight-users >>>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> _______________________________________________ >>>>>>>>>> >>>>>>>>>> >>>>>>>>>>> Powered by www.kitware.com >>>>>>>>>>> >>>>>>>>>>> Visit other Kitware open-source projects at >>>>>>>>>>> http://www.kitware.com/opensource/opensource.html >>>>>>>>>>> >>>>>>>>>>> Kitware offers ITK Training Courses, for more information visit: >>>>>>>>>>> >>>>>>>>>> http://kitware.com/products/protraining.php >>>>>>>>>> >>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> Please keep messages on-topic and check the ITK FAQ at: >>>>>>>>>>> http://www.itk.org/Wiki/ITK_FAQ >>>>>>>>>>> >>>>>>>>>>> Follow this link to subscribe/unsubscribe: >>>>>>>>>>> >>>>>>>>>> http://public.kitware.com/mailman/listinfo/insight-developers >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>> >>>>>>>> >>>>>> >>>> >>> >
_______________________________________________ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Kitware offers ITK Training Courses, for more information visit: http://kitware.com/products/protraining.php Please keep messages on-topic and check the ITK FAQ at: http://www.itk.org/Wiki/ITK_FAQ Follow this link to subscribe/unsubscribe: http://public.kitware.com/mailman/listinfo/insight-developers
