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https://issues.apache.org/jira/browse/AIRAVATA-1712?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]
Eroma updated AIRAVATA-1712:
----------------------------
Summary: Experiments on BR2 fails during creating scratch directory in
gw111 (was: Experiments on BR2 fails during creating scratch directory in w111)
> Experiments on BR2 fails during creating scratch directory in gw111
> -------------------------------------------------------------------
>
> Key: AIRAVATA-1712
> URL: https://issues.apache.org/jira/browse/AIRAVATA-1712
> Project: Airavata
> Issue Type: Bug
> Affects Versions: 0.16
> Environment: http://dev.test-drive.airavata.org/portal/pga/public/
> Reporter: Eroma
>
> Created and launched multiple experiments (Amber_Sander, Echo and AutoDock)
> on BR2.
> Experiment failed with exp state = FAILED and No job status.
> Error message displayed in PGA
> org.apache.airavata.gsi.ssh.api.SSHApiException: Failed during creating
> directory
> :/N/dc2/scratch/cgateway/gta-work-dirs/ECHO_BR21_38839719-5068-4e5d-b1d3-05eaf73efdc4
> to remote file bigred2.uits.iu.edu:rFile at
> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.makeDirectory(GSISSHAbstractCluster.java:581)
> at
> org.apache.airavata.gfac.ssh.handler.SSHDirectorySetupHandler.makeDirectory(SSHDirectorySetupHandler.java:83)
> at
> org.apache.airavata.gfac.ssh.handler.SSHDirectorySetupHandler.invoke(SSHDirectorySetupHandler.java:63)
> at
> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:844)
> at
> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:635)
> at
> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:437)
> at
> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:148)
> at
> org.apache.airavata.gfac.core.utils.InputHandlerWorker.run(InputHandlerWorker.java:47)
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
> at java.lang.Thread.run(Thread.java:745) Caused by:
> org.apache.airavata.gsi.ssh.api.SSHApiException: mkdir: cannot create
> directory `/N/dc2/scratch': Permission denied at
> org.apache.airavata.gsi.ssh.util.SSHUtils.makeDirectory(SSHUtils.java:698) at
> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.makeDirectory(GSISSHAbstractCluster.java:554)
> ... 10 more org.apache.airavata.gfac.GFacException: Error Invoking
> Handlers:Error Executing a InFlow Handler
> org.apache.airavata.gfac.GFacException: Error launching the Job at
> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:450)
> at
> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:148)
> at
> org.apache.airavata.gfac.core.utils.InputHandlerWorker.run(InputHandlerWorker.java:47)
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
> at java.lang.Thread.run(Thread.java:745) Caused by:
> org.apache.airavata.gfac.GFacException: Error Invoking Handlers:Error
> Executing a InFlow Handler at
> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:692)
> at
> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.submitJob(BetterGfacImpl.java:437)
> ... 5 more Caused by: org.apache.airavata.gfac.GFacException: Error Invoking
> Handlers:Error Executing a InFlow Handler at
> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:859)
> at
> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.launch(BetterGfacImpl.java:635)
> ... 6 more Caused by: org.apache.airavata.gfac.GFacException: Error
> Executing a InFlow Handler at
> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:848)
> ... 7 more Caused by: org.apache.airavata.gsi.ssh.api.SSHApiException:
> Failed during creating directory
> :/N/dc2/scratch/cgateway/gta-work-dirs/ECHO_BR21_38839719-5068-4e5d-b1d3-05eaf73efdc4
> to remote file bigred2.uits.iu.edu:rFile at
> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.makeDirectory(GSISSHAbstractCluster.java:581)
> at
> org.apache.airavata.gfac.ssh.handler.SSHDirectorySetupHandler.makeDirectory(SSHDirectorySetupHandler.java:83)
> at
> org.apache.airavata.gfac.ssh.handler.SSHDirectorySetupHandler.invoke(SSHDirectorySetupHandler.java:63)
> at
> org.apache.airavata.gfac.core.cpi.BetterGfacImpl.invokeInFlowHandlers(BetterGfacImpl.java:844)
> ... 7 more Caused by: org.apache.airavata.gsi.ssh.api.SSHApiException:
> mkdir: cannot create directory `/N/dc2/scratch': Permission denied at
> org.apache.airavata.gsi.ssh.util.SSHUtils.makeDirectory(SSHUtils.java:698) at
> org.apache.airavata.gsi.ssh.impl.GSISSHAbstractCluster.makeDirectory(GSISSHAbstractCluster.java:554)
> ... 10
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