[
https://issues.apache.org/jira/browse/AIRAVATA-2746?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16434097#comment-16434097
]
Eroma commented on AIRAVATA-2746:
---------------------------------
Two more experiments have failed with error [2] which are similar. These
failures have occurred at environment setup.
[2]
org.apache.airavata.helix.impl.task.TaskOnFailException: Error Code :
3822ae38-197f-40a3-9bc4-0c73ec3346b3, Task
TASK_47217b92-2f21-473a-b98a-c70617559172 failed due to Failed to setup
environment of task TASK_47217b92-2f21-473a-b98a-c70617559172, Error while
initializing ssh agent for compute resource
carbonate.uits.iu.edu_42a3397f-e2c6-4fda-ac9c-d8fb25be82e7 to token
e415b180-7a40-4ad7-8a82-b77b909b70a1 at
org.apache.airavata.helix.impl.task.AiravataTask.onFail(AiravataTask.java:101)
at
org.apache.airavata.helix.impl.task.env.EnvSetupTask.onRun(EnvSetupTask.java:53)
at
org.apache.airavata.helix.impl.task.AiravataTask.onRun(AiravataTask.java:268)
at org.apache.airavata.helix.core.AbstractTask.run(AbstractTask.java:82) at
org.apache.helix.task.TaskRunner.run(TaskRunner.java:71) at
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) at
java.util.concurrent.FutureTask.run(FutureTask.java:266) at
java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:180)
at
java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:293)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:748) Caused by:
org.apache.airavata.agents.api.AgentException: Error while initializing ssh
agent for compute resource
carbonate.uits.iu.edu_42a3397f-e2c6-4fda-ac9c-d8fb25be82e7 to token
e415b180-7a40-4ad7-8a82-b77b909b70a1 at
org.apache.airavata.helix.agent.ssh.SshAgentAdaptor.init(SshAgentAdaptor.java:116)
at
org.apache.airavata.helix.core.support.AdaptorSupportImpl.fetchAdaptor(AdaptorSupportImpl.java:59)
at
org.apache.airavata.helix.impl.task.env.EnvSetupTask.onRun(EnvSetupTask.java:41)
... 10 more Caused by: org.apache.airavata.agents.api.AgentException: Could
not create ssh session for host carbonate.uits.iu.edu at
org.apache.airavata.helix.agent.ssh.SshAgentAdaptor.init(SshAgentAdaptor.java:84)
at
org.apache.airavata.helix.agent.ssh.SshAgentAdaptor.init(SshAgentAdaptor.java:112)
... 12 more Caused by: com.jcraft.jsch.JSchException: Auth cancel at
com.jcraft.jsch.Session.connect(Session.java:511) at
com.jcraft.jsch.Session.connect(Session.java:183) at
org.apache.airavata.helix.agent.ssh.SshAgentAdaptor.init(SshAgentAdaptor.java:81)
... 13 more
> Job completed and experiment failed due to error in initializing SSH agent
> --------------------------------------------------------------------------
>
> Key: AIRAVATA-2746
> URL: https://issues.apache.org/jira/browse/AIRAVATA-2746
> Project: Airavata
> Issue Type: Bug
> Components: helix implementation
> Affects Versions: 0.18
> Reporter: Eroma
> Assignee: Dimuthu Upeksha
> Priority: Major
> Fix For: 0.18
>
>
> # Submitted a batch of experiments and got this error as an intermittent
> error.
> # Job status is COMPLETED but experiment is FAILED due to the error [1]
> [1]
> rg.apache.airavata.helix.impl.task.TaskOnFailException: Error Code :
> c8fdb6ff-e1ca-470f-9858-b5d08e9334bd, Task
> TASK_2dd64a31-44b9-4358-b962-122fdfb36415 failed due to Failed to obtain
> adaptor for compute resource
> carbonate.uits.iu.edu_42a3397f-e2c6-4fda-ac9c-d8fb25be82e7 in task
> TASK_2dd64a31-44b9-4358-b962-122fdfb36415, Error while initializing ssh agent
> for compute resource
> carbonate.uits.iu.edu_42a3397f-e2c6-4fda-ac9c-d8fb25be82e7 to token
> e415b180-7a40-4ad7-8a82-b77b909b70a1 at
> org.apache.airavata.helix.impl.task.AiravataTask.onFail(AiravataTask.java:101)
> at
> org.apache.airavata.helix.impl.task.staging.ArchiveTask.onRun(ArchiveTask.java:142)
> at
> org.apache.airavata.helix.impl.task.AiravataTask.onRun(AiravataTask.java:268)
> at org.apache.airavata.helix.core.AbstractTask.run(AbstractTask.java:82) at
> org.apache.helix.task.TaskRunner.run(TaskRunner.java:71) at
> java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) at
> java.util.concurrent.FutureTask.run(FutureTask.java:266) at
> java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:180)
> at
> java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:293)
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
> at java.lang.Thread.run(Thread.java:748) Caused by:
> org.apache.airavata.agents.api.AgentException: Error while initializing ssh
> agent for compute resource
> carbonate.uits.iu.edu_42a3397f-e2c6-4fda-ac9c-d8fb25be82e7 to token
> e415b180-7a40-4ad7-8a82-b77b909b70a1 at
> org.apache.airavata.helix.agent.ssh.SshAgentAdaptor.init(SshAgentAdaptor.java:116)
> at
> org.apache.airavata.helix.core.support.AdaptorSupportImpl.fetchAdaptor(AdaptorSupportImpl.java:59)
> at
> org.apache.airavata.helix.impl.task.staging.DataStagingTask.getComputeResourceAdaptor(DataStagingTask.java:90)
> at
> org.apache.airavata.helix.impl.task.staging.ArchiveTask.onRun(ArchiveTask.java:80)
> ... 10 more Caused by: org.apache.airavata.agents.api.AgentException: Could
> not create ssh session for host carbonate.uits.iu.edu at
> org.apache.airavata.helix.agent.ssh.SshAgentAdaptor.init(SshAgentAdaptor.java:84)
> at
> org.apache.airavata.helix.agent.ssh.SshAgentAdaptor.init(SshAgentAdaptor.java:112)
> ... 13 more Caused by: com.jcraft.jsch.JSchException: Auth cancel at
> com.jcraft.jsch.Session.connect(Session.java:511) at
> com.jcraft.jsch.Session.connect(Session.java:183) at
> org.apache.airavata.helix.agent.ssh.SshAgentAdaptor.init(SshAgentAdaptor.java:81)
> ... 14 more
>
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