[ https://issues.apache.org/jira/browse/AIRAVATA-2833?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ]
Dimuthu Upeksha resolved AIRAVATA-2833. --------------------------------------- Resolution: Fixed Added job submission retrying logic > Several experiments failed at various stages of job submission due to > connection lost > ------------------------------------------------------------------------------------- > > Key: AIRAVATA-2833 > URL: https://issues.apache.org/jira/browse/AIRAVATA-2833 > Project: Airavata > Issue Type: Bug > Components: helix implementation > Affects Versions: 0.18 > Environment: https://staging.seagrid.org/ > Reporter: Eroma > Assignee: Dimuthu Upeksha > Priority: Major > Fix For: 0.18 > > > While submitting a batch of jobs, several failed in a single cluster due to > connection lost. > Experiment has failed at uploading input file, output transfer and creating > archive.tar. Error in log [1]. Anything we could do here? Try again? resubmit > the task? > > > Exi ID: > SLM001-QEspresso-JS:2_d01e50dd-74fe-434a-87b3-e4668b827da5 > SLM001-QEspresso-JS:1_b29c6476-8944-4f6d-8946-b2e9f20b2acf > SLM001-QEspresso-JS:0_cd3d980d-017e-4ebe-91f7-85d1157feb94 > > [1] > org.apache.airavata.helix.impl.task.TaskOnFailException: Error Code : > cc1c8295-e5ec-44bf-b705-eceddfca3b1a, Task > TASK_b6ea333e-7468-4221-8b87-09050d7d053c failed due to Failed uploading the > input file to > /N/SEAGrid_scratch/PROCESS_1694a674-3dd7-4693-868e-b74444fd2b8d/ from local > path > /tmp/PROCESS_1694a674-3dd7-4693-868e-b74444fd2b8d/temp_inputs/Al.sample1.in, > net.schmizz.sshj.connection.ConnectionException: [CONNECTION_LOST] Did not > receive any keep-alive response for 25 seconds at > org.apache.airavata.helix.impl.task.AiravataTask.onFail(AiravataTask.java:102) > at > org.apache.airavata.helix.impl.task.staging.InputDataStagingTask.onRun(InputDataStagingTask.java:137) > at > org.apache.airavata.helix.impl.task.AiravataTask.onRun(AiravataTask.java:311) > at org.apache.airavata.helix.core.AbstractTask.run(AbstractTask.java:90) at > org.apache.helix.task.TaskRunner.run(TaskRunner.java:71) at > java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) at > java.util.concurrent.FutureTask.run(FutureTask.java:266) at > java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:180) > at > java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:293) > at > java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) > at > java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) > at java.lang.Thread.run(Thread.java:748) Caused by: > org.apache.airavata.agents.api.AgentException: > net.schmizz.sshj.connection.ConnectionException: [CONNECTION_LOST] Did not > receive any keep-alive response for 25 seconds at > org.apache.airavata.helix.adaptor.SSHJAgentAdaptor.copyFileTo(SSHJAgentAdaptor.java:155) > at > org.apache.airavata.helix.impl.task.staging.InputDataStagingTask.onRun(InputDataStagingTask.java:119) > ... 10 more Caused by: net.schmizz.sshj.connection.ConnectionException: > [CONNECTION_LOST] Did not receive any keep-alive response for 25 seconds at > net.schmizz.keepalive.KeepAliveRunner.checkMaxReached(KeepAliveRunner.java:64) > at > net.schmizz.keepalive.KeepAliveRunner.doKeepAlive(KeepAliveRunner.java:56) at > net.schmizz.keepalive.KeepAlive.run(KeepAlive.java:63) -- This message was sent by Atlassian JIRA (v7.6.3#76005)