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https://issues.apache.org/jira/browse/BEAM-8115?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16943183#comment-16943183
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Kyle Weaver commented on BEAM-8115:
-----------------------------------

> user pipeline options that are processed within the main entry point, i.e. 
>that become properties of transforms

It would be much more complicated to rewrite the pipeline itself, especially if 
these properties are set according to some arbitrary logic at pipeline 
construction time. If this class of options-turned-transforms is not too 
common, it would be better to work around them, rather than hacking on the jar 
code.

> Overwrite portable Flink application jar pipeline options at runtime
> --------------------------------------------------------------------
>
>                 Key: BEAM-8115
>                 URL: https://issues.apache.org/jira/browse/BEAM-8115
>             Project: Beam
>          Issue Type: New Feature
>          Components: runner-flink
>            Reporter: Kyle Weaver
>            Assignee: Kyle Weaver
>            Priority: Major
>
> In the first iteration of portable Flink application jars, all pipeline 
> options are set at job creation time and cannot be later modified at runtime. 
> There should be a way to pass arguments to the jar to write/overwrite 
> pipeline options.



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