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https://issues.apache.org/jira/browse/HBASE-20322?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16421029#comment-16421029
 ] 

Hadoop QA commented on HBASE-20322:
-----------------------------------

| (x) *{color:red}-1 overall{color}* |
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|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue}  0m 
12s{color} | {color:blue} Docker mode activated. {color} |
|| || || || {color:brown} Prechecks {color} ||
| {color:blue}0{color} | {color:blue} findbugs {color} | {color:blue}  0m  
0s{color} | {color:blue} Findbugs executables are not available. {color} |
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green}  0m  
0s{color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green}  0m  
0s{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red}  0m  
0s{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
|| || || || {color:brown} branch-1.4 Compile Tests {color} ||
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green}  7m 
51s{color} | {color:green} branch-1.4 passed {color} |
| {color:red}-1{color} | {color:red} compile {color} | {color:red}  0m 
19s{color} | {color:red} hbase-server in branch-1.4 failed with JDK v1.8.0_163. 
{color} |
| {color:red}-1{color} | {color:red} compile {color} | {color:red}  0m 
16s{color} | {color:red} hbase-server in branch-1.4 failed with JDK v1.7.0_171. 
{color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green}  1m 
21s{color} | {color:green} branch-1.4 passed {color} |
| {color:green}+1{color} | {color:green} shadedjars {color} | {color:green}  3m 
59s{color} | {color:green} branch has no errors when building our shaded 
downstream artifacts. {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green}  0m 
31s{color} | {color:green} branch-1.4 passed with JDK v1.8.0_163 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green}  0m 
36s{color} | {color:green} branch-1.4 passed with JDK v1.7.0_171 {color} |
|| || || || {color:brown} Patch Compile Tests {color} ||
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green}  1m 
31s{color} | {color:green} the patch passed {color} |
| {color:red}-1{color} | {color:red} compile {color} | {color:red}  0m 
13s{color} | {color:red} hbase-server in the patch failed with JDK v1.8.0_163. 
{color} |
| {color:red}-1{color} | {color:red} javac {color} | {color:red}  0m 13s{color} 
| {color:red} hbase-server in the patch failed with JDK v1.8.0_163. {color} |
| {color:red}-1{color} | {color:red} compile {color} | {color:red}  0m 
16s{color} | {color:red} hbase-server in the patch failed with JDK v1.7.0_171. 
{color} |
| {color:red}-1{color} | {color:red} javac {color} | {color:red}  0m 16s{color} 
| {color:red} hbase-server in the patch failed with JDK v1.7.0_171. {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green}  1m 
19s{color} | {color:green} hbase-server: The patch generated 0 new + 39 
unchanged - 2 fixed = 39 total (was 41) {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green}  0m 
 0s{color} | {color:green} The patch has no whitespace issues. {color} |
| {color:green}+1{color} | {color:green} shadedjars {color} | {color:green}  2m 
33s{color} | {color:green} patch has no errors when building our shaded 
downstream artifacts. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green}  
8m 37s{color} | {color:green} Patch does not cause any errors with Hadoop 2.4.1 
2.5.2 2.6.5 2.7.4. {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green}  0m 
25s{color} | {color:green} the patch passed with JDK v1.8.0_163 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green}  0m 
36s{color} | {color:green} the patch passed with JDK v1.7.0_171 {color} |
|| || || || {color:brown} Other Tests {color} ||
| {color:red}-1{color} | {color:red} unit {color} | {color:red}101m  8s{color} 
| {color:red} hbase-server in the patch failed. {color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green}  0m 
23s{color} | {color:green} The patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black}128m 30s{color} | 
{color:black} {color} |
\\
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|| Reason || Tests ||
| Failed junit tests | hadoop.hbase.regionserver.TestAtomicOperation |
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\\
|| Subsystem || Report/Notes ||
| Docker | Client=17.05.0-ce Server=17.05.0-ce Image:yetus/hbase:74e3133 |
| JIRA Issue | HBASE-20322 |
| JIRA Patch URL | 
https://issues.apache.org/jira/secure/attachment/12917061/HBASE-20322.branch-1.4.001.patch
 |
| Optional Tests |  asflicense  javac  javadoc  unit  findbugs  shadedjars  
hadoopcheck  hbaseanti  checkstyle  compile  |
| uname | Linux 69f9911d2f16 3.13.0-139-generic #188-Ubuntu SMP Tue Jan 9 
14:43:09 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux |
| Build tool | maven |
| Personality | 
/home/jenkins/jenkins-slave/workspace/PreCommit-HBASE-Build/component/dev-support/hbase-personality.sh
 |
| git revision | branch-1.4 / dadb42d |
| maven | version: Apache Maven 3.0.5 |
| Default Java | 1.7.0_171 |
| Multi-JDK versions |  /usr/lib/jvm/java-8-openjdk-amd64:1.8.0_163 
/usr/lib/jvm/java-7-openjdk-amd64:1.7.0_171 |
| compile | 
https://builds.apache.org/job/PreCommit-HBASE-Build/12249/artifact/patchprocess/branch-compile-hbase-server-jdk1.8.0_163.txt
 |
| compile | 
https://builds.apache.org/job/PreCommit-HBASE-Build/12249/artifact/patchprocess/branch-compile-hbase-server-jdk1.7.0_171.txt
 |
| compile | 
https://builds.apache.org/job/PreCommit-HBASE-Build/12249/artifact/patchprocess/patch-compile-hbase-server-jdk1.8.0_163.txt
 |
| javac | 
https://builds.apache.org/job/PreCommit-HBASE-Build/12249/artifact/patchprocess/patch-compile-hbase-server-jdk1.8.0_163.txt
 |
| compile | 
https://builds.apache.org/job/PreCommit-HBASE-Build/12249/artifact/patchprocess/patch-compile-hbase-server-jdk1.7.0_171.txt
 |
| javac | 
https://builds.apache.org/job/PreCommit-HBASE-Build/12249/artifact/patchprocess/patch-compile-hbase-server-jdk1.7.0_171.txt
 |
| unit | 
https://builds.apache.org/job/PreCommit-HBASE-Build/12249/artifact/patchprocess/patch-unit-hbase-server.txt
 |
|  Test Results | 
https://builds.apache.org/job/PreCommit-HBASE-Build/12249/testReport/ |
| Max. process+thread count | 3752 (vs. ulimit of 10000) |
| modules | C: hbase-server U: hbase-server |
| Console output | 
https://builds.apache.org/job/PreCommit-HBASE-Build/12249/console |
| Powered by | Apache Yetus 0.7.0   http://yetus.apache.org |


This message was automatically generated.



> CME in StoreScanner causes region server crash
> ----------------------------------------------
>
>                 Key: HBASE-20322
>                 URL: https://issues.apache.org/jira/browse/HBASE-20322
>             Project: HBase
>          Issue Type: Bug
>    Affects Versions: 1.3.2
>            Reporter: Thiruvel Thirumoolan
>            Assignee: Thiruvel Thirumoolan
>            Priority: Major
>             Fix For: 1.5.0, 1.3.3, 1.4.4
>
>         Attachments: HBASE-20322.branch-1.3.001.patch, 
> HBASE-20322.branch-1.4.001.patch
>
>
> RS crashed with ConcurrentModificationException on our 1.3 cluster, stack 
> trace below. [~toffer] and I checked and there is a race condition between 
> flush and scanner close. When StoreScanner.updateReaders() is updating the 
> scanners after a newly flushed file (in this trace below a region close 
> during a split), the client's scanner could be closing thus causing CME.
> Its rare, but since it crashes the region server, needs to be fixed.
> FATAL regionserver.HRegionServer [regionserver/<rs>] : ABORTING region server 
> <rs>: Replay of WAL required. Forcing server shutdown
> org.apache.hadoop.hbase.DroppedSnapshotException: region: <regionname>
> at 
> org.apache.hadoop.hbase.regionserver.HRegion.internalFlushCacheAndCommit(HRegion.java:2579)
> at 
> org.apache.hadoop.hbase.regionserver.HRegion.internalFlushcache(HRegion.java:2255)
> at 
> org.apache.hadoop.hbase.regionserver.HRegion.internalFlushcache(HRegion.java:2217)
> at 
> org.apache.hadoop.hbase.regionserver.HRegion.internalFlushcache(HRegion.java:2207)
> at org.apache.hadoop.hbase.regionserver.HRegion.doClose(HRegion.java:1501)
> at org.apache.hadoop.hbase.regionserver.HRegion.close(HRegion.java:1420)
> at 
> org.apache.hadoop.hbase.regionserver.SplitTransactionImpl.stepsBeforePONR(SplitTransactionImpl.java:398)
> at 
> org.apache.hadoop.hbase.regionserver.SplitTransactionImpl.createDaughters(SplitTransactionImpl.java:278)
> at 
> org.apache.hadoop.hbase.regionserver.SplitTransactionImpl.execute(SplitTransactionImpl.java:566)
> at 
> org.apache.hadoop.hbase.regionserver.SplitRequest.doSplitting(SplitRequest.java:82)
> at 
> org.apache.hadoop.hbase.regionserver.SplitRequest.run(SplitRequest.java:154)
> at 
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
> at 
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
> at java.lang.Thread.run(Thread.java:745)
> Caused by: java.util.ConcurrentModificationException
> at java.util.ArrayList$Itr.checkForComodification(ArrayList.java:901)
> at java.util.ArrayList$Itr.next(ArrayList.java:851)
> at 
> org.apache.hadoop.hbase.regionserver.StoreScanner.clearAndClose(StoreScanner.java:797)
> at 
> org.apache.hadoop.hbase.regionserver.StoreScanner.updateReaders(StoreScanner.java:825)
> at 
> org.apache.hadoop.hbase.regionserver.HStore.notifyChangedReadersObservers(HStore.java:1155)
> PS: ignore the line no in the above stack trace, method calls should help 
> understand whats happening.



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