VladRodionov commented on a change in pull request #623: HBASE-22749:
Distributed MOB compactions
URL: https://github.com/apache/hbase/pull/623#discussion_r336206677
##########
File path: hbase-server/src/main/java/org/apache/hadoop/hbase/mob/MobUtils.java
##########
@@ -907,6 +789,143 @@ public static boolean hasMobColumns(TableDescriptor htd)
{
return false;
}
+ /**
+ * Get list of Mob column families (if any exists)
+ * @param htd table descriptor
+ * @return list of Mob column families
+ */
+ public static List<ColumnFamilyDescriptor>
getMobColumnFamilies(TableDescriptor htd){
+
+ List<ColumnFamilyDescriptor> fams = new
ArrayList<ColumnFamilyDescriptor>();
+ ColumnFamilyDescriptor[] hcds = htd.getColumnFamilies();
+ for (ColumnFamilyDescriptor hcd : hcds) {
+ if (hcd.isMobEnabled()) {
+ fams.add(hcd);
+ }
+ }
+ return fams;
+ }
+
+ /**
+ * Performs housekeeping file cleaning (called by MOB Cleaner chore)
+ * @param conf configuration
+ * @param table table name
+ * @throws IOException
+ */
+ public static void cleanupObsoleteMobFiles(Configuration conf, TableName
table)
+ throws IOException {
+
+ try (final Connection conn = ConnectionFactory.createConnection(conf);
+ final Admin admin = conn.getAdmin();) {
+ TableDescriptor htd = admin.getDescriptor(table);
+ List<ColumnFamilyDescriptor> list = getMobColumnFamilies(htd);
+ if (list.size() == 0) {
+ LOG.info("Skipping non-MOB table [" + table + "]");
+ return;
+ }
+ Path rootDir = FSUtils.getRootDir(conf);
+ Path tableDir = FSUtils.getTableDir(rootDir, table);
+ // How safe is this call?
+ List<Path> regionDirs = FSUtils.getRegionDirs(FileSystem.get(conf),
tableDir);
+
+ Set<String> allActiveMobFileName = new HashSet<String>();
+ FileSystem fs = FileSystem.get(conf);
+ for (Path regionPath: regionDirs) {
+ for (ColumnFamilyDescriptor hcd: list) {
+ String family = hcd.getNameAsString();
+ Path storePath = new Path(regionPath, family);
+ boolean succeed = false;
+ Set<String> regionMobs = new HashSet<String>();
+ while(!succeed) {
+ //TODO handle FNFE
+ RemoteIterator<LocatedFileStatus> rit =
fs.listLocatedStatus(storePath);
+ List<Path> storeFiles = new ArrayList<Path>();
+ // Load list of store files first
+ while(rit.hasNext()) {
+ Path p = rit.next().getPath();
+ if (fs.isFile(p)) {
+ storeFiles.add(p);
+ }
+ }
+ try {
+ for(Path pp: storeFiles) {
+ HStoreFile sf = new HStoreFile(fs, pp, conf,
CacheConfig.DISABLED,
+ BloomType.NONE, true);
+ sf.initReader();
+ byte[] mobRefData =
sf.getMetadataValue(HStoreFile.MOB_FILE_REFS);
+ byte[] mobCellCountData =
sf.getMetadataValue(HStoreFile.MOB_CELLS_COUNT);
+ byte[] bulkloadMarkerData =
sf.getMetadataValue(HStoreFile.BULKLOAD_TASK_KEY);
+ if (mobRefData == null && (mobCellCountData != null ||
+ bulkloadMarkerData == null)) {
+ LOG.info("Found old store file with no MOB_FILE_REFS: " + pp
+ +" - can not proceed until all old files will be
MOB-compacted");
+ return;
+ } else if (mobRefData == null) {
+ LOG.info("Skipping file without MOB references (can be
bulkloaded file):"+ pp);
+ continue;
+ }
+ String[] mobs = new String(mobRefData).split(",");
+ regionMobs.addAll(Arrays.asList(mobs));
+ }
+ } catch (FileNotFoundException e) {
+ //TODO
+ LOG.warn(e.getMessage());
+ continue;
+ }
+ succeed = true;
+ }
+ // Add MOB refs for current region/family
+ allActiveMobFileName.addAll(regionMobs);
+ } // END column families
+ }//END regions
+
+ // Now scan MOB directories and find MOB files with no references to them
+ long now = System.currentTimeMillis();
+ long minAgeToArchive =
conf.getLong(MobConstants.MOB_MINIMUM_FILE_AGE_TO_ARCHIVE_KEY,
+
MobConstants.DEFAULT_MOB_MINIMUM_FILE_AGE_TO_ARCHIVE);
+ for (ColumnFamilyDescriptor hcd: list) {
+ List<Path> toArchive = new ArrayList<Path>();
+ String family = hcd.getNameAsString();
+ Path dir = getMobFamilyPath(conf, table, family);
+ RemoteIterator<LocatedFileStatus> rit = fs.listLocatedStatus(dir);
+ while(rit.hasNext()) {
+ LocatedFileStatus lfs = rit.next();
+ Path p = lfs.getPath();
+ if (!allActiveMobFileName.contains(p.getName())) {
+ // MOB is not in a list of active references, but it can be too
+ // fresh, skip it in this case
+ /*DEBUG*/ LOG.debug(" Age=" + (now -
fs.getFileStatus(p).getModificationTime()) +
+ " MOB file="+ p);
+ if (now - fs.getFileStatus(p).getModificationTime() >
minAgeToArchive) {
+ toArchive.add(p);
+ } else {
+ LOG.debug(" Skipping fresh file: " + p);
+ }
+ }
+ }
+ LOG.info(" MOB Cleaner found "+ toArchive.size()+" files for
family="+family);
+ removeMobFiles(conf, table, family.getBytes(), toArchive);
+ LOG.info(" MOB Cleaner archived "+ toArchive.size()+" files");
+ }
+ }
+ }
+
+
+
+
+ public static long getNumberOfMobFiles(Configuration conf, TableName
tableName, String family)
Review comment:
Fixed.
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