Adam Brusselback created MADLIB-1195:
----------------------------------------
Summary: pgxn not installing madlib with postgres 10
Key: MADLIB-1195
URL: https://issues.apache.org/jira/browse/MADLIB-1195
Project: Apache MADlib
Issue Type: Bug
Components: Build System
Reporter: Adam Brusselback
When attempting to install Madlib 1.13 on Postgres 10 using the pgxn client on
Debian 9.2, I get a failure during the install.
{code:shell}
# pgxn install madlib
INFO: best version: madlib 1.13.0
INFO: saving /tmp/tmp71a430/madlib-1.13.0.zip
INFO: unpacking: /tmp/tmp71a430/madlib-1.13.0.zip
INFO: running configure
-- The C compiler identification is GNU 6.3.0
-- The CXX compiler identification is GNU 6.3.0
-- Check for working C compiler: /usr/bin/gcc
-- Check for working C compiler: /usr/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/g++
-- Check for working CXX compiler: /usr/bin/g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Could NOT find Boost
-- No sufficiently recent version (>= 1.47) of Boost was found. Will download.
-- Found PythonInterp: /usr/bin/python (found version "2.7.13")
-- Found PostgreSQL: /usr/lib/postgresql/10/bin/postgres
-- Found PostgreSQL_10: /usr/lib/postgresql/10/bin/postgres
>> Adding PostgreSQL 10.0 (x86_64) to target list...
-- Could NOT find Greenplum (missing: GREENPLUM_EXECUTABLE)
-- Could NOT find HAWQ (missing: HAWQ_EXECUTABLE)
-- Using default web-based MathJax
-- Could NOT find FLEX (missing: FLEX_EXECUTABLE) (Required is at least
version "2.5.33")
-- Could NOT find BISON (missing: BISON_EXECUTABLE) (Required is at least
version "2.4")
-- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
-- Could not find recent versions of at least one of flex, bison, doxygen, or
dot (part of graphviz, needed for doxygen). Documentation will not be built.
-- A complete LaTeX installation could not be found. Compiling the design
document will not be possible.
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/tmp71a430/madlib-1.13.0/build
INFO: building extension
make -C build all
make[1]: Entering directory '/tmp/tmp71a430/madlib-1.13.0/build'
make[2]: Entering directory '/tmp/tmp71a430/madlib-1.13.0/build'
make[3]: Entering directory '/tmp/tmp71a430/madlib-1.13.0/build'
Scanning dependencies of target pythonFiles
make[3]: Leaving directory '/tmp/tmp71a430/madlib-1.13.0/build'
[ 0%] Built target pythonFiles
make[3]: Entering directory '/tmp/tmp71a430/madlib-1.13.0/build'
Scanning dependencies of target EP_eigen
make[3]: Leaving directory '/tmp/tmp71a430/madlib-1.13.0/build'
make[3]: Entering directory '/tmp/tmp71a430/madlib-1.13.0/build'
[ 0%] Creating directories for 'EP_eigen'
[ 0%] Performing download step (download, verify and extract) for 'EP_eigen'
-- Downloading...
dst='/tmp/tmp71a430/madlib-1.13.0/build/third_party/downloads/3.2.tar.gz'
timeout='none'
-- Using src='https://github.com/madlib/eigen/archive/branches/3.2.tar.gz'
-- Downloading... done
-- extracting...
src='/tmp/tmp71a430/madlib-1.13.0/build/third_party/downloads/3.2.tar.gz'
dst='/tmp/tmp71a430/madlib-1.13.0/build/third_party/src/EP_eigen'
-- extracting... [tar xfz]
-- extracting... [analysis]
-- extracting... [rename]
-- extracting... [clean up]
-- extracting... done
[ 0%] No patch step for 'EP_eigen'
[ 0%] No update step for 'EP_eigen'
[ 0%] Performing configure step for 'EP_eigen'
Ignored: cmake -GUnix Makefiles
/tmp/tmp71a430/madlib-1.13.0/build/third_party/src/EP_eigen
[ 0%] Performing build step for 'EP_eigen'
Ignored: make
[ 0%] Performing install step for 'EP_eigen'
Ignored: make
[ 1%] Completed 'EP_eigen'
make[3]: Leaving directory '/tmp/tmp71a430/madlib-1.13.0/build'
[ 1%] Built target EP_eigen
make[3]: Entering directory '/tmp/tmp71a430/madlib-1.13.0/build'
Scanning dependencies of target EP_pyxb
make[3]: Leaving directory '/tmp/tmp71a430/madlib-1.13.0/build'
make[3]: Entering directory '/tmp/tmp71a430/madlib-1.13.0/build'
[ 1%] Creating directories for 'EP_pyxb'
[ 1%] Performing download step (download, verify and extract) for 'EP_pyxb'
-- Downloading...
dst='/tmp/tmp71a430/madlib-1.13.0/build/third_party/downloads/PyXB-1.2.6.tar.gz'
timeout='none'
-- Using src='http://sourceforge.net/projects/pyxb/files/PyXB-1.2.6.tar.gz'
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-- verifying file...
file='/tmp/tmp71a430/madlib-1.13.0/build/third_party/downloads/PyXB-1.2.6.tar.gz'
-- Downloading... done
-- extracting...
src='/tmp/tmp71a430/madlib-1.13.0/build/third_party/downloads/PyXB-1.2.6.tar.gz'
dst='/tmp/tmp71a430/madlib-1.13.0/build/third_party/src/EP_pyxb'
-- extracting... [tar xfz]
-- extracting... [analysis]
-- extracting... [rename]
-- extracting... [clean up]
-- extracting... done
[ 1%] Performing patch step for 'EP_pyxb'
/tmp/tmp71a430/madlib-1.13.0/src/patch/PyXB.sh: 8:
/tmp/tmp71a430/madlib-1.13.0/src/patch/PyXB.sh: patch: not found
src/CMakeFiles/EP_pyxb.dir/build.make:101: recipe for target
'third_party/src/EP_pyxb-stamp/EP_pyxb-patch' failed
make[3]: *** [third_party/src/EP_pyxb-stamp/EP_pyxb-patch] Error 127
make[3]: Leaving directory '/tmp/tmp71a430/madlib-1.13.0/build'
CMakeFiles/Makefile2:181: recipe for target 'src/CMakeFiles/EP_pyxb.dir/all'
failed
make[2]: *** [src/CMakeFiles/EP_pyxb.dir/all] Error 2
make[2]: Leaving directory '/tmp/tmp71a430/madlib-1.13.0/build'
Makefile:149: recipe for target 'all' failed
make[1]: *** [all] Error 2
make[1]: Leaving directory '/tmp/tmp71a430/madlib-1.13.0/build'
Makefile:5: recipe for target 'all' failed
make: *** [all] Error 2
ERROR: command returned 2: make PG_CONFIG=/usr/bin/pg_config all
{code}
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