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https://issues.apache.org/jira/browse/MJAVADOC-452?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15304830#comment-15304830
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Richard Sand commented on MJAVADOC-452:
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Hi Robert - thanks for replying!

The fixes for 3,4, and 5 all involve changes to the same method 
updateJavadocTags so its going to be difficult to create separate patches for 
them.

The patch I uploaded to the case also included the patches for the 2 JUnit test 
sample pages. Understand that I did not change the actual tests, I only changed 
the sample pages it compares the output with, so that the sample page now has 
the tags in the proper order as created by the goal. The two failures were 
simply due to fix #3 - because the old behavior added missing tags at the 
bottom of the javadoc, instead of preserving order, so those two JUnit tests 
were comparing to an output file that had the tags in the wrong order. I will 
doublecheck the patch file to make sure the JUnit test pages are in there. 

Regarding #6, I'll reply in the MJAVADOC-451 thread. Thanks again!

> Several fixes for comment corruption in fix goal
> ------------------------------------------------
>
>                 Key: MJAVADOC-452
>                 URL: https://issues.apache.org/jira/browse/MJAVADOC-452
>             Project: Maven Javadoc Plugin
>          Issue Type: Bug
>          Components: javadoc
>    Affects Versions: 2.10.3
>            Reporter: Richard Sand
>              Labels: patch
>         Attachments: maven-javadoc-plugin-MJAVADOC452.patch
>
>
> I've attached a patch to this issue that fixes several problems in 
> javadoc:fix, including issue MJAVADOC-420,MJAVADOC-434, and MJAVADOC-451, and 
> adds some improvements to the fix goal.
> 1) added a new config parameter "removeUnknownThrows", to tell the plugin to 
> remove a @throws tag if the exception class is not actually thrown. 
> Previously it only warned. I set the default value to "false" to preserve 
> existing behavior
> 2) in "processFix", I added a check to see if the content had actually been 
> changed before writing to disk. This preserves file timestamps and provides a 
> clear indication if any changes were actually made
> 3) a problem in "updateJavadocTags" for method comments specifically, where, 
> if a throws tag was unknown, it would be written at the bottom of the 
> comments e.g. after @return, @since etc. I fixed updateJavadocTags so that 
> method tags are always output in the prescribed order
> 4) I fixed issue MJAVADOC-420, where if two method parameters existed with 
> overlapping names (e.g. @param thing @param thing2), then the second 
> parameter would be added twice
> 5) there was an issue if a comment erroneously contained the same parameter 
> twice (.e.g @param thing, @param thing), where both tags would be duplicated, 
> and all instances would have the description of the first. this was fixed in 
> "updateJavadocTags" and "addMissingJavadocTags"
> 6) Includes the same fix as attached to MJAVADOC-451, which adds a "skip" 
> parameter, which is useful when used in conjunction with "force". Also this 
> parameter prevents "clirr" from causing javadoc:fix from being re-invoked 
> when clirr is kicked off, which would cause an infinite loop of 
> fix-->clirr-->fix-->clirr. This scenario is prevented by internally passing 
> the "skip" parameter into the invocation of clirr
> I believe the patch will also resolve MJAVADOC-434, corrupted files 
> (basically the end-comment tag was left in the middle of the comment block 
> causing syntax errors) because I also observed this behavior and I don't now 
> after the patch, but I didn't actually trace down the root cause of 434 to be 
> certain
> Lastly I updated some of the log messages to be more descriptive and 
> indicative of the actual activity (e.g. changed "fixing" to "analyzing").
> Now that the tags are output in the prescribed order, two of the JUnit test 
> "expected" java output files needed to be updated to put the @return tag 
> below their @param tags
> The attached patch file updates AbstractFixJavadocMojo.jar, and two test 
> resources. All JUnit tests pass successfully. The patch was generated against 
> the 2.10.3 tag in SVN.



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