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https://jira.codehaus.org/browse/JXR-91?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=276822#comment-276822
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Benson Margulies commented on JXR-91:
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At least after my fix to JXR-93, this works fine for me. Please see the it I
added and see if it resembles your problem, since you didn't attach a test case.
> Javadoc link generation not working when using the 'reportPlugins' parameter
> of the site plugin instead of the 'reporting' section of the pom.
> ----------------------------------------------------------------------------------------------------------------------------------------------
>
> Key: JXR-91
> URL: https://jira.codehaus.org/browse/JXR-91
> Project: Maven JXR
> Issue Type: Wish
> Components: maven2 jxr plugin
> Affects Versions: 2.3
> Reporter: Christian Schulte
> Assignee: Benson Margulies
> Priority: Minor
>
> The JXR plugin doesn't generate the links to the Javadoc pages when using the
> 'reportPlugins' parameter of the site plugin instead of the 'reporting'
> section of the pom.
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