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https://issues.apache.org/jira/browse/SPARK-15439?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15299143#comment-15299143
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Miao Wang edited comment on SPARK-15439 at 5/24/16 11:31 PM:
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[~felixcheung] For the test case below:
test_that("Check masked functions", {
# Check that we are not masking any new function from base, stats, testthat
unexpectedly
masked <- conflicts(detail = TRUE)$`package:SparkR`
expect_true("describe" %in% masked) # only when with testthat..
func <- lapply(masked, function(x) { capture.output(showMethods(x))[[1]] })
funcSparkROrEmpty <- grepl("\\(package SparkR\\)$|^$", func)
maskedBySparkR <- masked[funcSparkROrEmpty]
namesOfMasked <- c("describe", "cov", "filter", "lag", "na.omit", "predict",
"sd", "var",
"colnames", "colnames<-", "intersect", "rank", "rbind",
"sample", "subset",
"summary", "transform", "drop", "window", "as.data.frame",
"endsWith", "startsWith")
When I run it in local, it has "endsWith" and "startsWith". However, when I
submit PR, Jekins test doesn't include these two.
I don't know what is the difference when running in local and running auto
test. I suspect version issue but I don't know where to set the version. Can
you help checking it? Thanks!
was (Author: wm624):
[~felixcheung] For the test case below:
test_that("Check masked functions", {
# Check that we are not masking any new function from base, stats, testthat
unexpectedly
masked <- conflicts(detail = TRUE)$`package:SparkR`
expect_true("describe" %in% masked) # only when with testthat..
func <- lapply(masked, function(x) { capture.output(showMethods(x))[[1]] })
funcSparkROrEmpty <- grepl("\\(package SparkR\\)$|^$", func)
maskedBySparkR <- masked[funcSparkROrEmpty]
namesOfMasked <- c("describe", "cov", "filter", "lag", "na.omit", "predict",
"sd", "var",
"colnames", "colnames<-", "intersect", "rank", "rbind",
"sample", "subset",
"summary", "transform", "drop", "window", "as.data.frame",
"endsWith", "startsWith")
When I run it in local, it has "endsWith" and "startsWith". However, when I
submit PR, Jekins test doesn't include these two.
I don't know what is the difference when running in local and running auto
test. Can you help checking it? Thanks!
> Failed to run unit test in SparkR
> ---------------------------------
>
> Key: SPARK-15439
> URL: https://issues.apache.org/jira/browse/SPARK-15439
> Project: Spark
> Issue Type: Bug
> Components: SparkR
> Affects Versions: 2.0.0
> Reporter: Kai Jiang
>
> Failed to run ./R/run-tests.sh around recent commit (May 19, 2016)
> It might be related to permission. It seems I used `sudo ./R/run-tests.sh`
> and it worked sometimes. Without permission, maybe we couldn't access /tmp
> directory. However, the SparkR unit testing is still brittle.
> [error
> message|https://gist.github.com/vectorijk/71f4ff34e3d34a628b8a3013f0ca2aa2]
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