marymwu created SPARK-15755: ------------------------------- Summary: java.lang.NullPointerException when run spark 2.0 setting spark.serializer=org.apache.spark.serializer.KryoSerializer Key: SPARK-15755 URL: https://issues.apache.org/jira/browse/SPARK-15755 Project: Spark Issue Type: Bug Affects Versions: 2.0.0 Reporter: marymwu
java.lang.NullPointerException when run spark 2.0 setting spark.serializer=org.apache.spark.serializer.KryoSerializer 16/05/27 15:15:28 ERROR TaskResultGetter: Exception while getting task result com.esotericsoftware.kryo.KryoException: java.lang.NullPointerException Serialization trace: underlying (org.apache.spark.util.BoundedPriorityQueue) at com.esotericsoftware.kryo.serializers.ObjectField.read(ObjectField.java:144) at com.esotericsoftware.kryo.serializers.FieldSerializer.read(FieldSerializer.java:551) at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:793) at com.twitter.chill.SomeSerializer.read(SomeSerializer.scala:25) at com.twitter.chill.SomeSerializer.read(SomeSerializer.scala:19) at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:793) at org.apache.spark.serializer.KryoSerializerInstance.deserialize(KryoSerializer.scala:312) at org.apache.spark.scheduler.DirectTaskResult.value(TaskResult.scala:87) at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply$mcV$sp(TaskResultGetter.scala:66) at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply(TaskResultGetter.scala:57) at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply(TaskResultGetter.scala:57) at org.apache.spark.util.Utils$.logUncaughtExceptions(Utils.scala:1793) at org.apache.spark.scheduler.TaskResultGetter$$anon$2.run(TaskResultGetter.scala:56) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) at java.lang.Thread.run(Thread.java:745) Caused by: java.lang.NullPointerException at org.apache.spark.sql.catalyst.expressions.codegen.LazilyGeneratedOrdering.compare(GenerateOrdering.scala:157) at org.apache.spark.sql.catalyst.expressions.codegen.LazilyGeneratedOrdering.compare(GenerateOrdering.scala:148) at scala.math.Ordering$$anon$4.compare(Ordering.scala:111) at java.util.PriorityQueue.siftUpUsingComparator(PriorityQueue.java:649) at java.util.PriorityQueue.siftUp(PriorityQueue.java:627) at java.util.PriorityQueue.offer(PriorityQueue.java:329) at java.util.PriorityQueue.add(PriorityQueue.java:306) at com.twitter.chill.java.PriorityQueueSerializer.read(PriorityQueueSerializer.java:78) at com.twitter.chill.java.PriorityQueueSerializer.read(PriorityQueueSerializer.java:31) at com.esotericsoftware.kryo.Kryo.readObject(Kryo.java:711) at com.esotericsoftware.kryo.serializers.ObjectField.read(ObjectField.java:125) ... 15 more 16/05/27 15:15:28 ERROR TaskResultGetter: Exception while getting task result com.esotericsoftware.kryo.KryoException: java.lang.NullPointerException Serialization trace: underlying (org.apache.spark.util.BoundedPriorityQueue) at com.esotericsoftware.kryo.serializers.ObjectField.read(ObjectField.java:144) at com.esotericsoftware.kryo.serializers.FieldSerializer.read(FieldSerializer.java:551) at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:793) at com.twitter.chill.SomeSerializer.read(SomeSerializer.scala:25) at com.twitter.chill.SomeSerializer.read(SomeSerializer.scala:19) at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:793) at org.apache.spark.serializer.KryoSerializerInstance.deserialize(KryoSerializer.scala:312) at org.apache.spark.scheduler.DirectTaskResult.value(TaskResult.scala:87) at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply$mcV$sp(TaskResultGetter.scala:66) at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply(TaskResultGetter.scala:57) at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply(TaskResultGetter.scala:57) at org.apache.spark.util.Utils$.logUncaughtExceptions(Utils.scala:1793) at org.apache.spark.scheduler.TaskResultGetter$$anon$2.run(TaskResultGetter.scala:56) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) at java.lang.Thread.run(Thread.java:745) Caused by: java.lang.NullPointerException at org.apache.spark.sql.catalyst.expressions.codegen.LazilyGeneratedOrdering.compare(GenerateOrdering.scala:157) at org.apache.spark.sql.catalyst.expressions.codegen.LazilyGeneratedOrdering.compare(GenerateOrdering.scala:148) at scala.math.Ordering$$anon$4.compare(Ordering.scala:111) at java.util.PriorityQueue.siftUpUsingComparator(PriorityQueue.java:649) at java.util.PriorityQueue.siftUp(PriorityQueue.java:627) at java.util.PriorityQueue.offer(PriorityQueue.java:329) at java.util.PriorityQueue.add(PriorityQueue.java:306) at com.twitter.chill.java.PriorityQueueSerializer.read(PriorityQueueSerializer.java:78) at com.twitter.chill.java.PriorityQueueSerializer.read(PriorityQueueSerializer.java:31) at com.esotericsoftware.kryo.Kryo.readObject(Kryo.java:711) at com.esotericsoftware.kryo.serializers.ObjectField.read(ObjectField.java:125) ... 15 more 16/05/27 15:15:28 ERROR TaskResultGetter: Exception while getting task result com.esotericsoftware.kryo.KryoException: java.lang.NullPointerException Serialization trace: underlying (org.apache.spark.util.BoundedPriorityQueue) at com.esotericsoftware.kryo.serializers.ObjectField.read(ObjectField.java:144) at com.esotericsoftware.kryo.serializers.FieldSerializer.read(FieldSerializer.java:551) at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:793) at com.twitter.chill.SomeSerializer.read(SomeSerializer.scala:25) at com.twitter.chill.SomeSerializer.read(SomeSerializer.scala:19) at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:793) at org.apache.spark.serializer.KryoSerializerInstance.deserialize(KryoSerializer.scala:312) at org.apache.spark.scheduler.DirectTaskResult.value(TaskResult.scala:87) at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply$mcV$sp(TaskResultGetter.scala:66) at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply(TaskResultGetter.scala:57) at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply(TaskResultGetter.scala:57) at org.apache.spark.util.Utils$.logUncaughtExceptions(Utils.scala:1793) at org.apache.spark.scheduler.TaskResultGetter$$anon$2.run(TaskResultGetter.scala:56) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) at java.lang.Thread.run(Thread.java:745) Caused by: java.lang.NullPointerException at org.apache.spark.sql.catalyst.expressions.codegen.LazilyGeneratedOrdering.compare(GenerateOrdering.scala:157) at org.apache.spark.sql.catalyst.expressions.codegen.LazilyGeneratedOrdering.compare(GenerateOrdering.scala:148) at scala.math.Ordering$$anon$4.compare(Ordering.scala:111) at java.util.PriorityQueue.siftUpUsingComparator(PriorityQueue.java:649) at java.util.PriorityQueue.siftUp(PriorityQueue.java:627) at java.util.PriorityQueue.offer(PriorityQueue.java:329) at java.util.PriorityQueue.add(PriorityQueue.java:306) at com.twitter.chill.java.PriorityQueueSerializer.read(PriorityQueueSerializer.java:78) at com.twitter.chill.java.PriorityQueueSerializer.read(PriorityQueueSerializer.java:31) at com.esotericsoftware.kryo.Kryo.readObject(Kryo.java:711) at com.esotericsoftware.kryo.serializers.ObjectField.read(ObjectField.java:125) ... 15 more 16/05/27 15:15:28 ERROR TaskResultGetter: Exception while getting task result com.esotericsoftware.kryo.KryoException: java.lang.NullPointerException Serialization trace: underlying (org.apache.spark.util.BoundedPriorityQueue) at com.esotericsoftware.kryo.serializers.ObjectField.read(ObjectField.java:144) at com.esotericsoftware.kryo.serializers.FieldSerializer.read(FieldSerializer.java:551) at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:793) at com.twitter.chill.SomeSerializer.read(SomeSerializer.scala:25) at com.twitter.chill.SomeSerializer.read(SomeSerializer.scala:19) at com.esotericsoftware.kryo.Kryo.readClassAndObject(Kryo.java:793) at org.apache.spark.serializer.KryoSerializerInstance.deserialize(KryoSerializer.scala:312) at org.apache.spark.scheduler.DirectTaskResult.value(TaskResult.scala:87) at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply$mcV$sp(TaskResultGetter.scala:66) at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply(TaskResultGetter.scala:57) at org.apache.spark.scheduler.TaskResultGetter$$anon$2$$anonfun$run$1.apply(TaskResultGetter.scala:57) at org.apache.spark.util.Utils$.logUncaughtExceptions(Utils.scala:1793) at org.apache.spark.scheduler.TaskResultGetter$$anon$2.run(TaskResultGetter.scala:56) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) at java.lang.Thread.run(Thread.java:745) Caused by: java.lang.NullPointerException at org.apache.spark.sql.catalyst.expressions.codegen.LazilyGeneratedOrdering.compare(GenerateOrdering.scala:157) at org.apache.spark.sql.catalyst.expressions.codegen.LazilyGeneratedOrdering.compare(GenerateOrdering.scala:148) at scala.math.Ordering$$anon$4.compare(Ordering.scala:111) at java.util.PriorityQueue.siftUpUsingComparator(PriorityQueue.java:649) at java.util.PriorityQueue.siftUp(PriorityQueue.java:627) at java.util.PriorityQueue.offer(PriorityQueue.java:329) at java.util.PriorityQueue.add(PriorityQueue.java:306) at com.twitter.chill.java.PriorityQueueSerializer.read(PriorityQueueSerializer.java:78) at com.twitter.chill.java.PriorityQueueSerializer.read(PriorityQueueSerializer.java:31) at com.esotericsoftware.kryo.Kryo.readObject(Kryo.java:711) at com.esotericsoftware.kryo.serializers.ObjectField.read(ObjectField.java:125) ... 15 more 16/05/27 15:15:28 INFO YarnScheduler: Cancelling stage 6 16/05/27 15:15:28 INFO YarnScheduler: Stage 6 was cancelled 16/05/27 15:15:28 INFO DAGScheduler: ResultStage 6 (run at AccessController.java:-2) failed in 1.075 s 16/05/27 15:15:28 WARN ExecutorAllocationManager: No stages are running, but numRunningTasks != 0 16/05/27 15:15:28 INFO DAGScheduler: Job 4 failed: run at AccessController.java:-2, took 14.847507 s 16/05/27 15:15:28 ERROR SparkExecuteStatementOperation: Error executing query, currentState RUNNING, org.apache.spark.SparkException: Job aborted due to stage failure: Exception while getting task result: com.esotericsoftware.kryo.KryoException: java.lang.NullPointerException Serialization trace: underlying (org.apache.spark.util.BoundedPriorityQueue) at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1450) at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1438) at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1437) at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59) at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48) at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1437) at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:811) at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:811) at scala.Option.foreach(Option.scala:257) at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:811) at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:1659) at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1618) at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1607) at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:48) at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:632) at org.apache.spark.SparkContext.runJob(SparkContext.scala:1863) at org.apache.spark.SparkContext.runJob(SparkContext.scala:1926) -- This message was sent by Atlassian JIRA (v6.3.4#6332) --------------------------------------------------------------------- To unsubscribe, e-mail: issues-unsubscr...@spark.apache.org For additional commands, e-mail: issues-h...@spark.apache.org