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https://issues.apache.org/jira/browse/SPARK-17321?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16105164#comment-16105164
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Thomas Graves commented on SPARK-17321:
---------------------------------------
Can you clarify? as stated above you should not be using
nodemanager.local-dirs. If you are you should look at reconfiguring yarn to
use the proper NM recovery dirs. see
https://issues.apache.org/jira/browse/SPARK-14963
if you aren't using NM recovery then yes we should fix this so spark doesn't
use backup db at all.
> YARN shuffle service should use good disk from yarn.nodemanager.local-dirs
> --------------------------------------------------------------------------
>
> Key: SPARK-17321
> URL: https://issues.apache.org/jira/browse/SPARK-17321
> Project: Spark
> Issue Type: Bug
> Components: YARN
> Affects Versions: 1.6.2, 2.0.0
> Reporter: yunjiong zhao
>
> We run spark on yarn, after enabled spark dynamic allocation, we notice some
> spark application failed randomly due to YarnShuffleService.
> From log I found
> {quote}
> 2016-08-29 11:33:03,450 ERROR org.apache.spark.network.TransportContext:
> Error while initializing Netty pipeline
> java.lang.NullPointerException
> at
> org.apache.spark.network.server.TransportRequestHandler.<init>(TransportRequestHandler.java:77)
> at
> org.apache.spark.network.TransportContext.createChannelHandler(TransportContext.java:159)
> at
> org.apache.spark.network.TransportContext.initializePipeline(TransportContext.java:135)
> at
> org.apache.spark.network.server.TransportServer$1.initChannel(TransportServer.java:123)
> at
> org.apache.spark.network.server.TransportServer$1.initChannel(TransportServer.java:116)
> at
> io.netty.channel.ChannelInitializer.channelRegistered(ChannelInitializer.java:69)
> at
> io.netty.channel.AbstractChannelHandlerContext.invokeChannelRegistered(AbstractChannelHandlerContext.java:133)
> at
> io.netty.channel.AbstractChannelHandlerContext.fireChannelRegistered(AbstractChannelHandlerContext.java:119)
> at
> io.netty.channel.DefaultChannelPipeline.fireChannelRegistered(DefaultChannelPipeline.java:733)
> at
> io.netty.channel.AbstractChannel$AbstractUnsafe.register0(AbstractChannel.java:450)
> at
> io.netty.channel.AbstractChannel$AbstractUnsafe.access$100(AbstractChannel.java:378)
> at
> io.netty.channel.AbstractChannel$AbstractUnsafe$1.run(AbstractChannel.java:424)
> at
> io.netty.util.concurrent.SingleThreadEventExecutor.runAllTasks(SingleThreadEventExecutor.java:357)
> at io.netty.channel.nio.NioEventLoop.run(NioEventLoop.java:357)
> at
> io.netty.util.concurrent.SingleThreadEventExecutor$2.run(SingleThreadEventExecutor.java:111)
> at java.lang.Thread.run(Thread.java:745)
> {quote}
> Which caused by the first disk in yarn.nodemanager.local-dirs was broken.
> If we enabled spark.yarn.shuffle.stopOnFailure(SPARK-16505) we might lost
> hundred nodes which is unacceptable.
> We have 12 disks in yarn.nodemanager.local-dirs, so why not use other good
> disks if the first one is broken?
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