[
https://issues.apache.org/jira/browse/SPARK-26675?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]
Tony Mao updated SPARK-26675:
-----------------------------
Description:
Run cmd
{code:java}
spark-submit --packages org.apache.spark:spark-avro_2.11:2.4.0 /nke/reformat.py
{code}
code in reformat.py
{code:java}
df = spark.read.option("multiline", "true").json("file:///nke/example1.json")
df.createOrReplaceTempView("traffic")
a = spark.sql("""SELECT store.*, store.name as store_name, store.dataSupplierId
as store_dataSupplierId, trafficSensor.*,
trafficSensor.name as trafficSensor_name, trafficSensor.dataSupplierId as
trafficSensor_dataSupplierId, readings.*
FROM (SELECT explode(stores) as store, explode(store.trafficSensors) as
trafficSensor,
explode(trafficSensor.trafficSensorReadings) as readings FROM traffic)""")
b = a.drop("trafficSensors", "trafficSensorReadings", "name", "dataSupplierId")
b.write.format("avro").save("file:///nke/curated/namesAndFavColors.avro")
{code}
Error message:
{code:java}
Traceback (most recent call last):
File "/nke/reformat.py", line 18, in <module>
b.select("store_name",
"store_dataSupplierId").write.format("avro").save("file:///nke/curated/namesAndFavColors.avro")
File "/usr/spark-2.4.0/python/lib/pyspark.zip/pyspark/sql/readwriter.py", line
736, in save
File "/usr/spark-2.4.0/python/lib/py4j-0.10.7-src.zip/py4j/java_gateway.py",
line 1257, in __call__
File "/usr/spark-2.4.0/python/lib/pyspark.zip/pyspark/sql/utils.py", line 63,
in deco
File "/usr/spark-2.4.0/python/lib/py4j-0.10.7-src.zip/py4j/protocol.py", line
328, in get_return_value
py4j.protocol.Py4JJavaError: An error occurred while calling o45.save.
: java.lang.NoSuchMethodError:
org.apache.avro.Schema.createUnion([Lorg/apache/avro/Schema;)Lorg/apache/avro/Schema;
at
org.apache.spark.sql.avro.SchemaConverters$.toAvroType(SchemaConverters.scala:185)
at
org.apache.spark.sql.avro.SchemaConverters$$anonfun$5.apply(SchemaConverters.scala:176)
at
org.apache.spark.sql.avro.SchemaConverters$$anonfun$5.apply(SchemaConverters.scala:174)
at scala.collection.Iterator$class.foreach(Iterator.scala:891)
at scala.collection.AbstractIterator.foreach(Iterator.scala:1334)
at scala.collection.IterableLike$class.foreach(IterableLike.scala:72)
at org.apache.spark.sql.types.StructType.foreach(StructType.scala:99)
at
org.apache.spark.sql.avro.SchemaConverters$.toAvroType(SchemaConverters.scala:174)
at
org.apache.spark.sql.avro.AvroFileFormat$$anonfun$7.apply(AvroFileFormat.scala:118)
at
org.apache.spark.sql.avro.AvroFileFormat$$anonfun$7.apply(AvroFileFormat.scala:118)
at scala.Option.getOrElse(Option.scala:121)
at
org.apache.spark.sql.avro.AvroFileFormat.prepareWrite(AvroFileFormat.scala:118)
at
org.apache.spark.sql.execution.datasources.FileFormatWriter$.write(FileFormatWriter.scala:103)
at
org.apache.spark.sql.execution.datasources.InsertIntoHadoopFsRelationCommand.run(InsertIntoHadoopFsRelationCommand.scala:159)
at
org.apache.spark.sql.execution.command.DataWritingCommandExec.sideEffectResult$lzycompute(commands.scala:104)
at
org.apache.spark.sql.execution.command.DataWritingCommandExec.sideEffectResult(commands.scala:102)
at
org.apache.spark.sql.execution.command.DataWritingCommandExec.doExecute(commands.scala:122)
at
org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$1.apply(SparkPlan.scala:131)
at
org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$1.apply(SparkPlan.scala:127)
at
org.apache.spark.sql.execution.SparkPlan$$anonfun$executeQuery$1.apply(SparkPlan.scala:155)
at
org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
at org.apache.spark.sql.execution.SparkPlan.executeQuery(SparkPlan.scala:152)
at org.apache.spark.sql.execution.SparkPlan.execute(SparkPlan.scala:127)
at
org.apache.spark.sql.execution.QueryExecution.toRdd$lzycompute(QueryExecution.scala:80)
at org.apache.spark.sql.execution.QueryExecution.toRdd(QueryExecution.scala:80)
at
org.apache.spark.sql.DataFrameWriter$$anonfun$runCommand$1.apply(DataFrameWriter.scala:668)
at
org.apache.spark.sql.DataFrameWriter$$anonfun$runCommand$1.apply(DataFrameWriter.scala:668)
at
org.apache.spark.sql.execution.SQLExecution$$anonfun$withNewExecutionId$1.apply(SQLExecution.scala:78)
at
org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:125)
at
org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:73)
at org.apache.spark.sql.DataFrameWriter.runCommand(DataFrameWriter.scala:668)
at
org.apache.spark.sql.DataFrameWriter.saveToV1Source(DataFrameWriter.scala:276)
at org.apache.spark.sql.DataFrameWriter.save(DataFrameWriter.scala:270)
at org.apache.spark.sql.DataFrameWriter.save(DataFrameWriter.scala:228)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:244)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
at py4j.Gateway.invoke(Gateway.java:282)
at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:132)
at py4j.commands.CallCommand.execute(CallCommand.java:79)
at py4j.GatewayConnection.run(GatewayConnection.java:238)
at java.lang.Thread.run(Thread.java:748){code}
was:
Run cmd
{code:java}
spark-submit --packages org.apache.spark:spark-avro_2.11:2.4.0 /nke/reformat.py
{code}
code in reformat.py
{code:java}
df = spark.read.option("multiline", "true").json("file:///nke/example1.json")
df.createOrReplaceTempView("traffic")
a = spark.sql("""SELECT store.*, store.name as store_name, store.dataSupplierId
as store_dataSupplierId, trafficSensor.*,
trafficSensor.name as trafficSensor_name, trafficSensor.dataSupplierId as
trafficSensor_dataSupplierId, readings.*
FROM (SELECT explode(stores) as store, explode(store.trafficSensors) as
trafficSensor,
explode(trafficSensor.trafficSensorReadings) as readings FROM traffic)""")
b = a.drop("trafficSensors", "trafficSensorReadings", "name", "dataSupplierId")
b.write.format("avro").save("file:///nke/curated/namesAndFavColors.avro")
{code}
Error message:
{code:java}
Traceback (most recent call last):
File "/nke/reformat.py", line 18, in <module>
b.select("store_name",
"store_dataSupplierId").write.format("avro").save("file:///nke/curated/namesAndFavColors.avro")
File "/usr/spark-2.4.0/python/lib/pyspark.zip/pyspark/sql/readwriter.py", line
736, in save
File "/usr/spark-2.4.0/python/lib/py4j-0.10.7-src.zip/py4j/java_gateway.py",
line 1257, in __call__
File "/usr/spark-2.4.0/python/lib/pyspark.zip/pyspark/sql/utils.py", line 63,
in deco
File "/usr/spark-2.4.0/python/lib/py4j-0.10.7-src.zip/py4j/protocol.py", line
328, in get_return_value
py4j.protocol.Py4JJavaError: An error occurred while calling o45.save.
: java.lang.NoSuchMethodError:
org.apache.avro.Schema.createUnion([Lorg/apache/avro/Schema;)Lorg/apache/avro/Schema;
at
org.apache.spark.sql.avro.SchemaConverters$.toAvroType(SchemaConverters.scala:185)
at
org.apache.spark.sql.avro.SchemaConverters$$anonfun$5.apply(SchemaConverters.scala:176)
at
org.apache.spark.sql.avro.SchemaConverters$$anonfun$5.apply(SchemaConverters.scala:174)
at scala.collection.Iterator$class.foreach(Iterator.scala:891)
at scala.collection.AbstractIterator.foreach(Iterator.scala:1334)
at scala.collection.IterableLike$class.foreach(IterableLike.scala:72)
at org.apache.spark.sql.types.StructType.foreach(StructType.scala:99)
at
org.apache.spark.sql.avro.SchemaConverters$.toAvroType(SchemaConverters.scala:174)
at
org.apache.spark.sql.avro.AvroFileFormat$$anonfun$7.apply(AvroFileFormat.scala:118)
at
org.apache.spark.sql.avro.AvroFileFormat$$anonfun$7.apply(AvroFileFormat.scala:118)
at scala.Option.getOrElse(Option.scala:121)
at
org.apache.spark.sql.avro.AvroFileFormat.prepareWrite(AvroFileFormat.scala:118)
at
org.apache.spark.sql.execution.datasources.FileFormatWriter$.write(FileFormatWriter.scala:103)
at
org.apache.spark.sql.execution.datasources.InsertIntoHadoopFsRelationCommand.run(InsertIntoHadoopFsRelationCommand.scala:159)
at
org.apache.spark.sql.execution.command.DataWritingCommandExec.sideEffectResult$lzycompute(commands.scala:104)
at
org.apache.spark.sql.execution.command.DataWritingCommandExec.sideEffectResult(commands.scala:102)
at
org.apache.spark.sql.execution.command.DataWritingCommandExec.doExecute(commands.scala:122)
at
org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$1.apply(SparkPlan.scala:131)
at
org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$1.apply(SparkPlan.scala:127)
at
org.apache.spark.sql.execution.SparkPlan$$anonfun$executeQuery$1.apply(SparkPlan.scala:155)
at
org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
at org.apache.spark.sql.execution.SparkPlan.executeQuery(SparkPlan.scala:152)
at org.apache.spark.sql.execution.SparkPlan.execute(SparkPlan.scala:127)
at
org.apache.spark.sql.execution.QueryExecution.toRdd$lzycompute(QueryExecution.scala:80)
at org.apache.spark.sql.execution.QueryExecution.toRdd(QueryExecution.scala:80)
at
org.apache.spark.sql.DataFrameWriter$$anonfun$runCommand$1.apply(DataFrameWriter.scala:668)
at
org.apache.spark.sql.DataFrameWriter$$anonfun$runCommand$1.apply(DataFrameWriter.scala:668)
at
org.apache.spark.sql.execution.SQLExecution$$anonfun$withNewExecutionId$1.apply(SQLExecution.scala:78)
at
org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:125)
at
org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:73)
at org.apache.spark.sql.DataFrameWriter.runCommand(DataFrameWriter.scala:668)
at
org.apache.spark.sql.DataFrameWriter.saveToV1Source(DataFrameWriter.scala:276)
at org.apache.spark.sql.DataFrameWriter.save(DataFrameWriter.scala:270)
at org.apache.spark.sql.DataFrameWriter.save(DataFrameWriter.scala:228)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:244)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
at py4j.Gateway.invoke(Gateway.java:282)
at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:132)
at py4j.commands.CallCommand.execute(CallCommand.java:79)
at py4j.GatewayConnection.run(GatewayConnection.java:238){code}
at java.lang.Thread.run(Thread.java:748)
> Error happened during creating avro files
> -----------------------------------------
>
> Key: SPARK-26675
> URL: https://issues.apache.org/jira/browse/SPARK-26675
> Project: Spark
> Issue Type: Bug
> Components: PySpark
> Affects Versions: 2.4.0
> Reporter: Tony Mao
> Priority: Major
>
> Run cmd
> {code:java}
> spark-submit --packages org.apache.spark:spark-avro_2.11:2.4.0
> /nke/reformat.py
> {code}
> code in reformat.py
> {code:java}
> df = spark.read.option("multiline", "true").json("file:///nke/example1.json")
> df.createOrReplaceTempView("traffic")
> a = spark.sql("""SELECT store.*, store.name as store_name,
> store.dataSupplierId as store_dataSupplierId, trafficSensor.*,
> trafficSensor.name as trafficSensor_name, trafficSensor.dataSupplierId as
> trafficSensor_dataSupplierId, readings.*
> FROM (SELECT explode(stores) as store, explode(store.trafficSensors) as
> trafficSensor,
> explode(trafficSensor.trafficSensorReadings) as readings FROM traffic)""")
> b = a.drop("trafficSensors", "trafficSensorReadings", "name",
> "dataSupplierId")
> b.write.format("avro").save("file:///nke/curated/namesAndFavColors.avro")
> {code}
> Error message:
> {code:java}
> Traceback (most recent call last):
> File "/nke/reformat.py", line 18, in <module>
> b.select("store_name",
> "store_dataSupplierId").write.format("avro").save("file:///nke/curated/namesAndFavColors.avro")
> File "/usr/spark-2.4.0/python/lib/pyspark.zip/pyspark/sql/readwriter.py",
> line 736, in save
> File "/usr/spark-2.4.0/python/lib/py4j-0.10.7-src.zip/py4j/java_gateway.py",
> line 1257, in __call__
> File "/usr/spark-2.4.0/python/lib/pyspark.zip/pyspark/sql/utils.py", line 63,
> in deco
> File "/usr/spark-2.4.0/python/lib/py4j-0.10.7-src.zip/py4j/protocol.py", line
> 328, in get_return_value
> py4j.protocol.Py4JJavaError: An error occurred while calling o45.save.
> : java.lang.NoSuchMethodError:
> org.apache.avro.Schema.createUnion([Lorg/apache/avro/Schema;)Lorg/apache/avro/Schema;
> at
> org.apache.spark.sql.avro.SchemaConverters$.toAvroType(SchemaConverters.scala:185)
> at
> org.apache.spark.sql.avro.SchemaConverters$$anonfun$5.apply(SchemaConverters.scala:176)
> at
> org.apache.spark.sql.avro.SchemaConverters$$anonfun$5.apply(SchemaConverters.scala:174)
> at scala.collection.Iterator$class.foreach(Iterator.scala:891)
> at scala.collection.AbstractIterator.foreach(Iterator.scala:1334)
> at scala.collection.IterableLike$class.foreach(IterableLike.scala:72)
> at org.apache.spark.sql.types.StructType.foreach(StructType.scala:99)
> at
> org.apache.spark.sql.avro.SchemaConverters$.toAvroType(SchemaConverters.scala:174)
> at
> org.apache.spark.sql.avro.AvroFileFormat$$anonfun$7.apply(AvroFileFormat.scala:118)
> at
> org.apache.spark.sql.avro.AvroFileFormat$$anonfun$7.apply(AvroFileFormat.scala:118)
> at scala.Option.getOrElse(Option.scala:121)
> at
> org.apache.spark.sql.avro.AvroFileFormat.prepareWrite(AvroFileFormat.scala:118)
> at
> org.apache.spark.sql.execution.datasources.FileFormatWriter$.write(FileFormatWriter.scala:103)
> at
> org.apache.spark.sql.execution.datasources.InsertIntoHadoopFsRelationCommand.run(InsertIntoHadoopFsRelationCommand.scala:159)
> at
> org.apache.spark.sql.execution.command.DataWritingCommandExec.sideEffectResult$lzycompute(commands.scala:104)
> at
> org.apache.spark.sql.execution.command.DataWritingCommandExec.sideEffectResult(commands.scala:102)
> at
> org.apache.spark.sql.execution.command.DataWritingCommandExec.doExecute(commands.scala:122)
> at
> org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$1.apply(SparkPlan.scala:131)
> at
> org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$1.apply(SparkPlan.scala:127)
> at
> org.apache.spark.sql.execution.SparkPlan$$anonfun$executeQuery$1.apply(SparkPlan.scala:155)
> at
> org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
> at org.apache.spark.sql.execution.SparkPlan.executeQuery(SparkPlan.scala:152)
> at org.apache.spark.sql.execution.SparkPlan.execute(SparkPlan.scala:127)
> at
> org.apache.spark.sql.execution.QueryExecution.toRdd$lzycompute(QueryExecution.scala:80)
> at
> org.apache.spark.sql.execution.QueryExecution.toRdd(QueryExecution.scala:80)
> at
> org.apache.spark.sql.DataFrameWriter$$anonfun$runCommand$1.apply(DataFrameWriter.scala:668)
> at
> org.apache.spark.sql.DataFrameWriter$$anonfun$runCommand$1.apply(DataFrameWriter.scala:668)
> at
> org.apache.spark.sql.execution.SQLExecution$$anonfun$withNewExecutionId$1.apply(SQLExecution.scala:78)
> at
> org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:125)
> at
> org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:73)
> at org.apache.spark.sql.DataFrameWriter.runCommand(DataFrameWriter.scala:668)
> at
> org.apache.spark.sql.DataFrameWriter.saveToV1Source(DataFrameWriter.scala:276)
> at org.apache.spark.sql.DataFrameWriter.save(DataFrameWriter.scala:270)
> at org.apache.spark.sql.DataFrameWriter.save(DataFrameWriter.scala:228)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.lang.reflect.Method.invoke(Method.java:498)
> at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:244)
> at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
> at py4j.Gateway.invoke(Gateway.java:282)
> at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:132)
> at py4j.commands.CallCommand.execute(CallCommand.java:79)
> at py4j.GatewayConnection.run(GatewayConnection.java:238)
> at java.lang.Thread.run(Thread.java:748){code}
>
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