[ https://issues.apache.org/jira/browse/SPARK-18105?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=17399465#comment-17399465 ]
dragonlong edited comment on SPARK-18105 at 8/16/21, 3:25 AM: -------------------------------------------------------------- [~cameron.todd] Hi, is any news? I issue this problem both in spark 2.3 and spark 3.0. Thanks. Here is the spark3.0 trace: {code:java} // code placeholder FetchFailed(BlockManagerId(19, xxxxx, 26065, None), shuffleId=0, mapId=841, reduceId=1024, message=FetchFailed(BlockManagerId(19, xxxxx, 26065, None), shuffleId=0, mapId=841, reduceId=1024, message=org.apache.spark.shuffle.FetchFailedException: Stream is corrupted at org.apache.spark.storage.ShuffleBlockFetcherIterator.throwFetchFailedException(ShuffleBlockFetcherIterator.scala:750) at org.apache.spark.storage.BufferReleasingInputStream.read(ShuffleBlockFetcherIterator.scala:823) at java.io.BufferedInputStream.fill(BufferedInputStream.java:246) at java.io.BufferedInputStream.read(BufferedInputStream.java:265) at java.io.DataInputStream.readInt(DataInputStream.java:387) at org.apache.spark.sql.execution.UnsafeRowSerializerInstance$$anon$2$$anon$3.readSize(UnsafeRowSerializer.scala:113) at org.apache.spark.sql.execution.UnsafeRowSerializerInstance$$anon$2$$anon$3.next(UnsafeRowSerializer.scala:129) at org.apache.spark.sql.execution.UnsafeRowSerializerInstance$$anon$2$$anon$3.next(UnsafeRowSerializer.scala:110) at scala.collection.Iterator$$anon$11.next(Iterator.scala:494) at scala.collection.Iterator$$anon$10.next(Iterator.scala:459) at org.apache.spark.util.CompletionIterator.next(CompletionIterator.scala:29) at org.apache.spark.InterruptibleIterator.next(InterruptibleIterator.scala:40) at scala.collection.Iterator$$anon$10.next(Iterator.scala:459) at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage6.processNext(Unknown Source) at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43) at org.apache.spark.sql.execution.WholeStageCodegenExec$$anon$1.hasNext(WholeStageCodegenExec.scala:729) at org.apache.spark.sql.execution.UnsafeExternalRowSorter.sort(UnsafeExternalRowSorter.java:225) at org.apache.spark.sql.execution.SortExec.$anonfun$doExecute$1(SortExec.scala:119) at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2(RDD.scala:872) at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2$adapted(RDD.scala:872) at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52) at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:349) at org.apache.spark.rdd.RDD.iterator(RDD.scala:313) at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90) at org.apache.spark.scheduler.Task.run(Task.scala:127) at org.apache.spark.executor.Executor$TaskRunner.$anonfun$runWithUgi$3(Executor.scala:462) at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1377) at org.apache.spark.executor.Executor$TaskRunner.runWithUgi(Executor.scala:465) at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:394) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) at java.lang.Thread.run(Thread.java:748) Caused by: java.io.IOException: Stream is corrupted at net.jpountz.lz4.LZ4BlockInputStream.refill(LZ4BlockInputStream.java:250) at net.jpountz.lz4.LZ4BlockInputStream.refill(LZ4BlockInputStream.java:226) at net.jpountz.lz4.LZ4BlockInputStream.read(LZ4BlockInputStream.java:157) at org.apache.spark.storage.BufferReleasingInputStream.read(ShuffleBlockFetcherIterator.scala:819) ... 30 more Caused by: net.jpountz.lz4.LZ4Exception: Error decoding offset 94821 of input buffer at net.jpountz.lz4.LZ4JNIFastDecompressor.decompress(LZ4JNIFastDecompressor.java:39) at net.jpountz.lz4.LZ4BlockInputStream.refill(LZ4BlockInputStream.java:245) ... 33 more {code} was (Author: dragonlong): [~cameron.todd] Hi, is any news? I issue this problem both in spark 2.3 and spark 3.0. Thanks. Here is the spark3.0 trace: {code:java} // code placeholder FetchFailed(BlockManagerId(19, xxxxx, 26065, None), shuffleId=0, mapId=841, reduceId=1024, message=FetchFailed(BlockManagerId(19, xxxxx, 26065, None), shuffleId=0, mapId=841, reduceId=1024, message=org.apache.spark.shuffle.FetchFailedException: Stream is corrupted at org.apache.spark.storage.ShuffleBlockFetcherIterator.throwFetchFailedException(ShuffleBlockFetcherIterator.scala:750) at org.apache.spark.storage.BufferReleasingInputStream.read(ShuffleBlockFetcherIterator.scala:823) at java.io.BufferedInputStream.fill(BufferedInputStream.java:246) at java.io.BufferedInputStream.read(BufferedInputStream.java:265) at java.io.DataInputStream.readInt(DataInputStream.java:387) at org.apache.spark.sql.execution.UnsafeRowSerializerInstance$$anon$2$$anon$3.readSize(UnsafeRowSerializer.scala:113) at org.apache.spark.sql.execution.UnsafeRowSerializerInstance$$anon$2$$anon$3.next(UnsafeRowSerializer.scala:129) at org.apache.spark.sql.execution.UnsafeRowSerializerInstance$$anon$2$$anon$3.next(UnsafeRowSerializer.scala:110) at scala.collection.Iterator$$anon$11.next(Iterator.scala:494) at scala.collection.Iterator$$anon$10.next(Iterator.scala:459) at org.apache.spark.util.CompletionIterator.next(CompletionIterator.scala:29) at org.apache.spark.InterruptibleIterator.next(InterruptibleIterator.scala:40) at scala.collection.Iterator$$anon$10.next(Iterator.scala:459) at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage6.processNext(Unknown Source) at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43) at org.apache.spark.sql.execution.WholeStageCodegenExec$$anon$1.hasNext(WholeStageCodegenExec.scala:729) at org.apache.spark.sql.execution.UnsafeExternalRowSorter.sort(UnsafeExternalRowSorter.java:225) at org.apache.spark.sql.execution.SortExec.$anonfun$doExecute$1(SortExec.scala:119) at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2(RDD.scala:872) at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2$adapted(RDD.scala:872) at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52) at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:349) at org.apache.spark.rdd.RDD.iterator(RDD.scala:313) at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90) at org.apache.spark.scheduler.Task.run(Task.scala:127) at org.apache.spark.executor.Executor$TaskRunner.$anonfun$runWithUgi$3(Executor.scala:462) at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1377) at org.apache.spark.executor.Executor$TaskRunner.runWithUgi(Executor.scala:465) at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:394) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) at java.lang.Thread.run(Thread.java:748)Caused by: java.io.IOException: Stream is corrupted at net.jpountz.lz4.LZ4BlockInputStream.refill(LZ4BlockInputStream.java:250) at net.jpountz.lz4.LZ4BlockInputStream.refill(LZ4BlockInputStream.java:226) at net.jpountz.lz4.LZ4BlockInputStream.read(LZ4BlockInputStream.java:157) at org.apache.spark.storage.BufferReleasingInputStream.read(ShuffleBlockFetcherIterator.scala:819) ... 30 moreCaused by: net.jpountz.lz4.LZ4Exception: Error decoding offset 94821 of input buffer at net.jpountz.lz4.LZ4JNIFastDecompressor.decompress(LZ4JNIFastDecompressor.java:39) at net.jpountz.lz4.LZ4BlockInputStream.refill(LZ4BlockInputStream.java:245) ... 33 more {code} > LZ4 failed to decompress a stream of shuffled data > -------------------------------------------------- > > Key: SPARK-18105 > URL: https://issues.apache.org/jira/browse/SPARK-18105 > Project: Spark > Issue Type: Bug > Components: Spark Core > Affects Versions: 3.0.1, 3.1.1 > Reporter: Davies Liu > Priority: Major > Attachments: TestWeightedGraph.java > > > When lz4 is used to compress the shuffle files, it may fail to decompress it > as "stream is corrupt" > {code} > Caused by: org.apache.spark.SparkException: Job aborted due to stage failure: > Task 92 in stage 5.0 failed 4 times, most recent failure: Lost task 92.3 in > stage 5.0 (TID 16616, 10.0.27.18): java.io.IOException: Stream is corrupted > at > org.apache.spark.io.LZ4BlockInputStream.refill(LZ4BlockInputStream.java:220) > at > org.apache.spark.io.LZ4BlockInputStream.available(LZ4BlockInputStream.java:109) > at java.io.BufferedInputStream.read(BufferedInputStream.java:353) > at java.io.DataInputStream.read(DataInputStream.java:149) > at com.google.common.io.ByteStreams.read(ByteStreams.java:828) > at com.google.common.io.ByteStreams.readFully(ByteStreams.java:695) > at > org.apache.spark.sql.execution.UnsafeRowSerializerInstance$$anon$3$$anon$1.next(UnsafeRowSerializer.scala:127) > at > org.apache.spark.sql.execution.UnsafeRowSerializerInstance$$anon$3$$anon$1.next(UnsafeRowSerializer.scala:110) > at scala.collection.Iterator$$anon$13.next(Iterator.scala:372) > at scala.collection.Iterator$$anon$11.next(Iterator.scala:328) > at > org.apache.spark.util.CompletionIterator.next(CompletionIterator.scala:30) > at > org.apache.spark.InterruptibleIterator.next(InterruptibleIterator.scala:43) > at scala.collection.Iterator$$anon$11.next(Iterator.scala:328) > at > org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIterator.sort_addToSorter$(Unknown > Source) > at > org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIterator.processNext(Unknown > Source) > at > org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43) > at > org.apache.spark.sql.execution.WholeStageCodegenExec$$anonfun$8$$anon$1.hasNext(WholeStageCodegenExec.scala:370) > at > org.apache.spark.sql.execution.datasources.DynamicPartitionWriterContainer.writeRows(WriterContainer.scala:397) > at > org.apache.spark.sql.execution.datasources.InsertIntoHadoopFsRelationCommand$$anonfun$run$1$$anonfun$apply$mcV$sp$1.apply(InsertIntoHadoopFsRelationCommand.scala:143) > at > org.apache.spark.sql.execution.datasources.InsertIntoHadoopFsRelationCommand$$anonfun$run$1$$anonfun$apply$mcV$sp$1.apply(InsertIntoHadoopFsRelationCommand.scala:143) > at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:70) > at org.apache.spark.scheduler.Task.run(Task.scala:86) > at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:274) > at > java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) > at > java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) > at java.lang.Thread.run(Thread.java:745) > {code} > https://github.com/jpountz/lz4-java/issues/89 -- This message was sent by Atlassian Jira (v8.3.4#803005) --------------------------------------------------------------------- To unsubscribe, e-mail: issues-unsubscr...@spark.apache.org For additional commands, e-mail: issues-h...@spark.apache.org