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https://issues.apache.org/jira/browse/SYSTEMML-768?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15707013#comment-15707013
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Kevin Bates commented on SYSTEMML-768:
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Submitted [PR 297|https://github.com/apache/incubator-systemml/pull/297]
> Test errors with "mvn clean verify"
> -----------------------------------
>
> Key: SYSTEMML-768
> URL: https://issues.apache.org/jira/browse/SYSTEMML-768
> Project: SystemML
> Issue Type: Bug
> Components: Test
> Affects Versions: SystemML 0.11
> Environment: MacOS El Capitan
> Reporter: Abhinav Maurya
> Assignee: Kevin Bates
> Priority: Critical
> Labels: build, easyfix
>
> 1. While installing required R packages, I get a warning that certain
> packages don't exist anymore. The error is "Warning: dependencies
> ‘GenomicRanges’, ‘graph’, ‘Rgraphviz’, ‘corpus.JSS.papers’ are not
> available". The log is attached as r-dependency-warnings.txt I don't think
> this led to any issues. However, my next error is also related to an R script
> execution failure.
> 2. I ran "mvn clean verify" All tests pass consistently except the 9 tests in
> CTableMatrixIgnoreZerosTest. The problem is related to R script execution.
> The error is:
> "CTableMatrixIgnoreZerosTest.testCTableMatrixIgnoreZerosRewriteDenseSP:70->runCTableTest:169->AutomatedTestBase.runRScript:1010
> failed to run script ./src/test/scripts/functions/ternary/CTableRowHist.R
> exception: java.lang.Exception: ERROR: R has ended irregularly" The detailed
> error log is attached in systemml-test-errors.txt It would be good to at
> least output the exact R script invocation that led to a test error.
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