Yesterday I ported my seam application to JBoss AS 4.2.1GA. I have setup the 
libraries. I forgot to place my datasource (*-ds.xml) file in the deploy folder 
but that was easily fixed. So, no problems with me either...

Here an excerpt from the log that I think matches yours:
anonymous wrote : 
  | 14:50:38,624 INFO  [JmxKernelAbstraction] installing MBean: 
jboss.j2ee:ear=AuthApplication.ear,jar=jboss-seam.jar,name=TimerServiceDispatcher,service=EJB3
 with dependencies:
  | 14:50:38,802 INFO  [EJBContainer] STARTED EJB: 
org.jboss.seam.async.TimerServiceDispatcher ejbName: TimerServiceDispatcher
  | 14:50:38,876 INFO  [JmxKernelAbstraction] creating wrapper delegate for: 
org.jboss.ejb3.stateful.StatefulContainer
  | 14:50:38,876 INFO  [JmxKernelAbstraction] installing MBean: 
jboss.j2ee:ear=AuthApplication.ear,jar=jboss-seam.jar,name=EjbTransaction,service=EJB3
 with dependencies:
  | 14:50:38,950 INFO  [EJBContainer] STARTED EJB: 
org.jboss.seam.transaction.EjbTransaction ejbName: EjbTransaction
  | 14:50:38,994 INFO  [EJB3Deployer] Deployed: 
file:/D:/AuthApplication.ear/jboss-seam.jar
  | 14:50:38,994 INFO  [TomcatDeployer] deploy, ctxPath=/AuthWebApp, 
warUrl=file:/D:/AuthApplication.ear/AuthWebApp.war/
  | 
  | 

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