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could you extract the zip manually? If the zip file itself is the problem please remove it. Where is the file located (network mount, local hdd, local usb mount, raid)?
duplicity copies backups to another location, is it possible that this process modifies the file, maybe something gona wrong during sync.
The problem is I handled the this case, this is why the Warning is logged, I don't know why the JVM crashes. Have you a crash dump of the JVM?
maybe upgrading the JRE to the latest 1.7.0 will help.