We see the same issue here and recreating or starting with a clean workspace seems to solve the problem at first and then any time later it reappears

Here an freshly generated Debug-Log:
Feb 06, 2014 12:16:51 PM [DEBUG] IntegritySCM - Start execution of checkout() routine...!
Feb 06, 2014 12:16:51 PM [DEBUG] IntegritySCM - buildEnvVars() invoked...!
Feb 06, 2014 12:16:51 PM [DEBUG] IntegritySCM - Creating Integrity API Session...
Feb 06, 2014 12:16:51 PM [DEBUG] IntegritySCM - api ping --user=jenkins --port=7001 --hostname=*** – returned exit code 0
Feb 06, 2014 12:16:51 PM [DEBUG] IntegritySCM - Successfully established connection jenkins@***:7001
Feb 06, 2014 12:16:51 PM [DEBUG] IntegritySCM - Preparing to execute si projectinfo for ***
Feb 06, 2014 12:16:56 PM [DEBUG] IntegritySCM - si projectinfo --user=jenkins --port=7001 --hostname=**l --project=** – returned exit code 0
Feb 06, 2014 12:16:56 PM [DEBUG] IntegritySCM - si projectinfo --user=jenkins --port=7001 --hostname=*** --project=*** – returned 0
Feb 06, 2014 12:16:56 PM [DEBUG] IntegritySCM - Preparing to execute si viewproject for ***
Feb 06, 2014 12:16:57 PM [DEBUG] IntegritySCM - Executed si viewproject --user=jenkins --port=7001 --hostname=*** --recurse --project=*** --fields=name,context,cpid,memberrev,membertimestamp,memberdescription,type – with interim
Feb 06, 2014 12:16:57 PM [DEBUG] IntegritySCM - Attempting to open connection to database: /var/lib/jenkins/jobs/**/builds/2014-02-06_12-15-08/IntegritySCM/**
Feb 06, 2014 12:17:00 PM [INFO] IntegritySCM - SQL Exception caught...
Feb 06, 2014 12:17:00 PM [INFO] IntegritySCM - java.sql.SQLException: Failed to create database '/var/lib/jenkins/jobs/**/builds/2014-02-06_12-15-08/IntegritySCM/**', see the next exception for details.
Feb 06, 2014 12:17:00 PM [DEBUG] IntegritySCM - Attempting to shut down database: /var/lib/jenkins/jobs/**/builds/2014-02-06_12-15-08/IntegritySCM/*
Feb 06, 2014 12:17:00 PM [INFO] IntegritySCM - Failed to shutdown database connection!
Feb 06, 2014 12:17:00 PM [INFO] IntegritySCM - SQL Error Code: 40000
Feb 06, 2014 12:17:00 PM [INFO] IntegritySCM - SQL Error State: XJ004
Feb 06, 2014 12:17:00 PM [INFO] IntegritySCM - Database '/var/lib/jenkins/jobs/***/builds/2014-02-06_12-15-08/IntegritySCM/CGW' not found.
Feb 06, 2014 12:17:00 PM [INFO] IntegritySCM - java.sql.SQLException: Database '/var/lib/jenkins/jobs/**/builds/2014-02-06_12-15-08/IntegritySCM/**' not found.
Feb 06, 2014 12:17:00 PM org.apache.commons.httpclient.HttpMethodBase readResponseBody
Warnung: Unsupported transfer encoding:
Feb 06, 2014 12:17:00 PM org.apache.commons.httpclient.HttpMethodBase readResponseBody
Information: Response content is not chunk-encoded
Feb 06, 2014 12:17:00 PM [DEBUG] IntegritySCM - Successfully disconnected connection jenkins@****:7001
Feb 06, 2014 12:17:00 PM [DEBUG] IntegritySCM - buildEnvVars() invoked...!
Feb 06, 2014 12:17:00 PM [DEBUG] IntegritySCM - buildEnvVars() invoked...!

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