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FYI - Similar error of incompatible InnerClasses attribute between "hudson.model.Queue$ItemList" and "hudson.model.Queue" occurs on fresh install of Jenkins (v1.5623) when trying to add a newly defined slave.
When an existing Jenkins installation is updated to latest (v1.5623) and multiple updates to the main configuration are made with restarts you can end up with all nodes disappearing.
In our case is occurring on RHEL - Linux version 2.6.18-348.6.1.el5