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Downgraded to 1.0.14 and it works fine:
[JaCoCo plugin] Collecting JaCoCo coverage data...
[JaCoCo plugin] */.exec;/classes;*/src/main/java; locations are configured
[JaCoCo plugin] Number of found exec files: 3
[JaCoCo plugin] Saving matched execfiles: /var/lib/jenkins/jobs/mjls-parent/workspace/automated-readers/target/jacoco.exec /var/lib/jenkins/jobs/mjls-parent/workspace/mjls-core/target/jacoco.exec /var/lib/jenkins/jobs/mjls-parent/workspace/mjls-web/target/jacoco.exec
[JaCoCo plugin] Saving matched class directories: /var/lib/jenkins/jobs/mjls-parent/workspace/automated-readers/target/classes /var/lib/jenkins/jobs/mjls-parent/workspace/mjls-core/target/classes /var/lib/jenkins/jobs/mjls-parent/workspace/mjls-web/target/classes /var/lib/jenkins/jobs/mjls-parent/workspace/mjls-web/target/mjls/WEB-INF/classes
[JaCoCo plugin] Saving matched source directories: /var/lib/jenkins/jobs/mjls-parent/workspace/automated-readers/src/main/java /var/lib/jenkins/jobs/mjls-parent/workspace/mjls-core/src/main/java /var/lib/jenkins/jobs/mjls-parent/workspace/mjls-web/src/main/java
[JaCoCo plugin] Loading inclusions files..
[JaCoCo plugin] inclusions: []
[JaCoCo plugin] exclusions: []
[JaCoCo plugin] Thresholds: JacocoHealthReportThresholds [minClass=0, maxClass=0, minMethod=0, maxMethod=0, minLine=0, maxLine=0, minBranch=0, maxBranch=0, minInstruction=0, maxInstruction=0, minComplexity=0, maxComplexity=0]
[JaCoCo plugin] Publishing the results..
[JaCoCo plugin] Loading packages..
[JaCoCo plugin] Done.
Finished: SUCCESS