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Robert Beddow can you explain what you mean by "git fetch" vs. "git checkout"?
When I think of "git fetch", I think you mean the timeout which is controlled by the setting in the "Advanced clone behaviours" field labeled "Timeout (in minutes) for clone and fetch operations".
When I think of "git checkout", I think you mean the timeout which is controlled by the setting in "Advanced checkout behaviours" field labeled "Timeout (in minutes) for checkout operation".
Is that what you mean in those two cases, or did you possibly miss setting the "Timeout (in minutes) for checkout operation"?