[
https://issues.apache.org/jira/browse/ARROW-12855?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]
Andraž Matkovič updated ARROW-12855:
------------------------------------
Labels: matlab (was: )
> error: no member named 'TableReader' in namespace during compilation
> --------------------------------------------------------------------
>
> Key: ARROW-12855
> URL: https://issues.apache.org/jira/browse/ARROW-12855
> Project: Apache Arrow
> Issue Type: Bug
> Components: MATLAB
> Affects Versions: 4.0.0
> Environment: MATLAB 2020a, Mac OS 11.2.1
> Reporter: Andraž Matkovič
> Priority: Major
> Labels: matlab
>
> I followed instructions for compilation of arrow under MATLAB
> ([https://github.com/apache/arrow/tree/master/matlab).] First I set
> environment variable ARROW_HOME, e.g.
>
> {code:java}
> setenv ARROW_HOME ~/.pyenv/versions/3.8.0/lib/python3.8/site-packages/pyarrow
> {code}
> (I also tried other pyarrow versions, even /usr/local, it's always the same).
>
> Next, when I run compile in MATLAB I get the following error:
> {code:java}
> Verbose mode is on.Verbose mode is on.... Looking for compiler 'Xcode
> Clang++' ...... Looking for environment variable 'DEVELOPER_DIR' ...No....
> Executing command 'xcode-select -print-path' ...Yes
> ('/Applications/Xcode.app/Contents/Developer').... Looking for folder
> '/Applications/Xcode.app/Contents/Developer' ...Yes.... Executing command
> 'which xcrun' ...Yes ('/usr/bin/xcrun').... Looking for folder '/usr/bin'
> ...Yes.... Executing command 'defaults read com.apple.dt.Xcode
> IDEXcodeVersionForAgreedToGMLicense' ...No.... Executing command 'defaults
> read /Library/Preferences/com.apple.dt.Xcode
> IDEXcodeVersionForAgreedToGMLicense' ...Yes ('11.0').... Executing command
> 'agreed=11.0 if echo $agreed | grep -E '[\.\"]' >/dev/null; then lhs=`expr
> "$agreed" : '\([0-9]*\)[\.].*'` rhs=`expr "$agreed" : '[0-9]*[\.]\(.*\)$'`
> if echo $rhs | grep -E '[\."]' >/dev/null; then rhs=`expr "$rhs" :
> '\([0-9]*\)[\.].*'` fi if [ $lhs -gt 4 ] || ( [ $lhs -eq 4 ] && [ $rhs -ge
> 3 ] ); then echo $agreed else exit 1 fi fi' ...Yes ('11.0').... Executing
> command 'xcrun -sdk macosx --show-sdk-path' ...Yes
> ('/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk')....
> Executing command 'xcrun -sdk macosx --show-sdk-version | awk 'BEGIN
> {FS="."} ; {print $1"."$2}'' ...Yes ('11.1').... Executing command 'clang
> --version | grep -Eo '[0-9]+\.[0-9]+\.[0-9]'|head -1' ...Yes ('12.0.0').Found
> installed compiler 'Xcode Clang++'.Set INCLUDE =
> /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1;/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/12.0.0/include;/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include;/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk/usr/include;/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk/System/Library/Frameworks;/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../include/c++/v1;/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/12.0.0/include;/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include;/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk/usr/include;/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk/System/Library/Frameworks;Options
> file
> details-------------------------------------------------------------------
> Compiler location: /Applications/Xcode.app/Contents/Developer Options file:
> /Users/andraz/Library/Application
> Support/MathWorks/MATLAB/R2020a/mex_C++_maci64.xml CMDLINE200 :
> /usr/bin/xcrun -sdk macosx11.1 clang++ \-Wl,-twolevel_namespace -undefined
> error -arch x86_64 -mmacosx-version-min=10.9
> -Wl,-syslibroot,/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk
> -framework Cocoa -bundle -stdlib=libc++ -Wl,-rpath '/usr/local/lib' -O
> -Wl,-exported_symbols_list,"/Applications/MATLAB_R2020a.app/extern/lib/maci64/mexFunction.map"
>
> -Wl,-exported_symbols_list,"/Applications/MATLAB_R2020a.app/extern/lib/maci64/c_exportsmexfileversion.map"
> -Wl,-U,_mexCreateMexFunction -Wl,-U,_mexDestroyMexFunction
> -Wl,-U,_mexFunctionAdapter
> -Wl,-exported_symbols_list,"/Applications/MATLAB_R2020a.app/extern/lib/maci64/cppMexFunction.map"
>
> /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/featherreadmex.o
>
> /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/feather_reader.o
>
> /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/handle_status.o
>
> /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/cpp_mexapi_version.o
> -larrow -L/usr/local/lib
> -L"/Applications/MATLAB_R2020a.app/bin/maci64" -lmx -lmex -lmat
> -L"/Applications/MATLAB_R2020a.app/extern/bin/maci64" -lMatlabDataArray
> -lMatlabEngine -o
> /Applications/Toolboxes/arrow/matlab/build_support/../build/featherreadmex.mexmaci64
> CC : /usr/bin/xcrun -sdk macosx11.1 clang CXX : /usr/bin/xcrun -sdk
> macosx11.1 clang++ DEFINES : -DMX_COMPAT_64 -DMATLAB_MEXCMD_RELEASE=R2018a
> -DUSE_MEX_CMD -DMATLAB_MEX_FILE MATLABMEX : -DMATLAB_MEX_FILE
> MACOSX_DEPLOYMENT_TARGET : 10.9 CFLAGS : -fno-common -arch x86_64
> -mmacosx-version-min=10.9 -fexceptions -isysroot
> /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk
> CXXFLAGS : -fno-common -arch x86_64 -mmacosx-version-min=10.9 -fexceptions
> -isysroot
> /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk
> -fobjc-arc -std=c++11 -stdlib=libc++ INCLUDE : -I"/usr/local/include"
> -I"/Applications/MATLAB_R2020a.app/extern/include"
> -I"/Applications/MATLAB_R2020a.app/simulink/include" CXXOPTIMFLAGS : -O2
> -fwrapv -DNDEBUG CXXDEBUGFLAGS : -g LD : /usr/bin/xcrun -sdk macosx11.1 clang
> LDXX : /usr/bin/xcrun -sdk macosx11.1 clang++ LDFLAGS :
> \-Wl,-twolevel_namespace -undefined error -arch x86_64
> -mmacosx-version-min=10.9
> -Wl,-syslibroot,/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk
> -framework Cocoa -bundle -stdlib=libc++ -Wl,-rpath '/usr/local/lib'
> LDBUNDLE : -bundle LINKEXPORT :
> -Wl,-exported_symbols_list,"/Applications/MATLAB_R2020a.app/extern/lib/maci64/mexFunction.map"
> LINKEXPORTVER :
> -Wl,-exported_symbols_list,"/Applications/MATLAB_R2020a.app/extern/lib/maci64/c_exportsmexfileversion.map"
> LINKEXPORTCPP : -Wl,-U,_mexCreateMexFunction -Wl,-U,_mexDestroyMexFunction
> -Wl,-U,_mexFunctionAdapter
> -Wl,-exported_symbols_list,"/Applications/MATLAB_R2020a.app/extern/lib/maci64/cppMexFunction.map"
> LINKLIBS : -larrow -L/usr/local/lib
> -L"/Applications/MATLAB_R2020a.app/bin/maci64" -lmx -lmex -lmat
> -L"/Applications/MATLAB_R2020a.app/extern/bin/maci64" -lMatlabDataArray
> -lMatlabEngine LDOPTIMFLAGS : -O LDDEBUGFLAGS : -g OBJEXT : .o LDEXT :
> .mexmaci64 SETENV : CC="/usr/bin/xcrun -sdk macosx11.1 clang"
> CXX="/usr/bin/xcrun -sdk macosx11.1 clang++"
> CFLAGS="-fno-common -arch x86_64 -mmacosx-version-min=10.9 -fexceptions
> -isysroot
> /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk
> -DMX_COMPAT_64 -DMATLAB_MEXCMD_RELEASE=R2018a -DUSE_MEX_CMD
> -DMATLAB_MEX_FILE " CXXFLAGS="-fno-common -arch x86_64
> -mmacosx-version-min=10.9 -fexceptions -isysroot
> /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk
> -fobjc-arc -std=c++11 -stdlib=libc++ -DMX_COMPAT_64
> -DMATLAB_MEXCMD_RELEASE=R2018a -DUSE_MEX_CMD -DMATLAB_MEX_FILE "
> COPTIMFLAGS="-O2 -fwrapv -DNDEBUG" CXXOPTIMFLAGS="-O2
> -fwrapv -DNDEBUG" CDEBUGFLAGS="-g"
> CXXDEBUGFLAGS="-g" LD="/usr/bin/xcrun -sdk macosx11.1 clang"
> LDXX="/usr/bin/xcrun -sdk macosx11.1 clang++"
> LDFLAGS="\-Wl,-twolevel_namespace -undefined error -arch x86_64
> -mmacosx-version-min=10.9
> -Wl,-syslibroot,/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk
> -framework Cocoa -bundle -stdlib=libc++ -Wl,-rpath '/usr/local/lib' -larrow
> -L/usr/local/lib -L"/Applications/MATLAB_R2020a.app/bin/maci64" -lmx
> -lmex -lmat -L"/Applications/MATLAB_R2020a.app/extern/bin/maci64"
> -lMatlabDataArray -lMatlabEngine
> -Wl,-exported_symbols_list,"/Applications/MATLAB_R2020a.app/extern/lib/maci64/mexFunction.map""
> LDDEBUGFLAGS="-g" DEVELOPER_DIR_CHECK : XCODE_DIR :
> /Applications/Xcode.app/Contents/Developer XCRUN_DIR : /usr/bin
> XCODE_AGREED_VERSION : 11.0 ISYSROOT :
> /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk
> SDKVER : 11.1 CLANG_VERSION : 12.0.0 MATLABROOT :
> /Applications/MATLAB_R2020a.app ARCH : maci64 SRC :
> "/Applications/Toolboxes/arrow/matlab/build_support/../src/featherreadmex.cc";"/Applications/Toolboxes/arrow/matlab/build_support/../src/feather_reader.cc";"/Applications/Toolboxes/arrow/matlab/build_support/../src/util/handle_status.cc";"/Applications/MATLAB_R2020a.app/extern/version/cpp_mexapi_version.cpp"
> OBJ :
> /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/featherreadmex.o;/var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/feather_reader.o;/var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/handle_status.o;/var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/cpp_mexapi_version.o
> OBJS :
> /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/featherreadmex.o
>
> /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/feather_reader.o
>
> /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/handle_status.o
>
> /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/cpp_mexapi_version.o
> SRCROOT :
> /Applications/Toolboxes/arrow/matlab/build_support/../src/featherreadmex DEF
> :
> /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/featherreadmex.def
> EXP :
> "/Applications/Toolboxes/arrow/matlab/build_support/../build/featherreadmex.exp"
> LIB :
> "/Applications/Toolboxes/arrow/matlab/build_support/../build/featherreadmex.lib"
> EXE :
> /Applications/Toolboxes/arrow/matlab/build_support/../build/featherreadmex.mexmaci64
> ILK :
> "/Applications/Toolboxes/arrow/matlab/build_support/../build/featherreadmex.ilk"
> MANIFEST :
> "/Applications/Toolboxes/arrow/matlab/build_support/../build/featherreadmex.mexmaci64.manifest"
> TEMPNAME :
> /Applications/Toolboxes/arrow/matlab/build_support/../build/featherreadmex
> EXEDIR : /Applications/Toolboxes/arrow/matlab/build_support/../build/ EXENAME
> : featherreadmex OPTIM : -O2 -fwrapv -DNDEBUG LINKOPTIM : -O CMDLINE100_0 :
> /usr/bin/xcrun -sdk macosx11.1 clang++ -c -DMX_COMPAT_64
> -DMATLAB_MEXCMD_RELEASE=R2018a -DUSE_MEX_CMD -DMATLAB_MEX_FILE
> -I"/usr/local/include" -I"/Applications/MATLAB_R2020a.app/extern/include"
> -I"/Applications/MATLAB_R2020a.app/simulink/include" -fno-common -arch x86_64
> -mmacosx-version-min=10.9 -fexceptions -isysroot
> /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk
> -fobjc-arc -std=c++11 -stdlib=libc++ -O2 -fwrapv -DNDEBUG
> "/Applications/Toolboxes/arrow/matlab/build_support/../src/featherreadmex.cc"
> -o
> /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/featherreadmex.o
> CMDLINE100_1 : /usr/bin/xcrun -sdk macosx11.1 clang++ -c -DMX_COMPAT_64
> -DMATLAB_MEXCMD_RELEASE=R2018a -DUSE_MEX_CMD -DMATLAB_MEX_FILE
> -I"/usr/local/include" -I"/Applications/MATLAB_R2020a.app/extern/include"
> -I"/Applications/MATLAB_R2020a.app/simulink/include" -fno-common -arch x86_64
> -mmacosx-version-min=10.9 -fexceptions -isysroot
> /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk
> -fobjc-arc -std=c++11 -stdlib=libc++ -O2 -fwrapv -DNDEBUG
> "/Applications/Toolboxes/arrow/matlab/build_support/../src/feather_reader.cc"
> -o
> /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/feather_reader.o
> CMDLINE100_2 : /usr/bin/xcrun -sdk macosx11.1 clang++ -c -DMX_COMPAT_64
> -DMATLAB_MEXCMD_RELEASE=R2018a -DUSE_MEX_CMD -DMATLAB_MEX_FILE
> -I"/usr/local/include" -I"/Applications/MATLAB_R2020a.app/extern/include"
> -I"/Applications/MATLAB_R2020a.app/simulink/include" -fno-common -arch x86_64
> -mmacosx-version-min=10.9 -fexceptions -isysroot
> /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk
> -fobjc-arc -std=c++11 -stdlib=libc++ -O2 -fwrapv -DNDEBUG
> "/Applications/Toolboxes/arrow/matlab/build_support/../src/util/handle_status.cc"
> -o
> /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/handle_status.o
> CMDLINE100_3 : /usr/bin/xcrun -sdk macosx11.1 clang++ -c -DMX_COMPAT_64
> -DMATLAB_MEXCMD_RELEASE=R2018a -DUSE_MEX_CMD -DMATLAB_MEX_FILE
> -I"/usr/local/include" -I"/Applications/MATLAB_R2020a.app/extern/include"
> -I"/Applications/MATLAB_R2020a.app/simulink/include" -fno-common -arch x86_64
> -mmacosx-version-min=10.9 -fexceptions -isysroot
> /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk
> -fobjc-arc -std=c++11 -stdlib=libc++ -O2 -fwrapv -DNDEBUG
> "/Applications/MATLAB_R2020a.app/extern/version/cpp_mexapi_version.cpp" -o
> /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/cpp_mexapi_version.o-------------------------------------------------------------------Building
> with 'Xcode Clang++'./usr/bin/xcrun -sdk macosx11.1 clang++ -c
> -DMX_COMPAT_64 -DMATLAB_MEXCMD_RELEASE=R2018a -DUSE_MEX_CMD
> -DMATLAB_MEX_FILE -I"/usr/local/include"
> -I"/Applications/MATLAB_R2020a.app/extern/include"
> -I"/Applications/MATLAB_R2020a.app/simulink/include" -fno-common -arch x86_64
> -mmacosx-version-min=10.9 -fexceptions -isysroot
> /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX11.1.sdk
> -fobjc-arc -std=c++11 -stdlib=libc++ -O2 -fwrapv -DNDEBUG
> "/Applications/Toolboxes/arrow/matlab/build_support/../src/featherreadmex.cc"
> -o
> /var/folders/s1/f1fgqkcs6bs4c13v_50btmd40000gn/T/mex_5123220870320_661/featherreadmex.oError
> using mexIn file included
> from/Applications/Toolboxes/arrow/matlab/build_support/../src/featherreadmex.cc:22:/Applications/Toolboxes/arrow/matlab/build_support/../src/feather_reader.h:69:33:
> error:no member named 'TableReader' in namespace 'arrow::ipc::feather'
> std::unique_ptr<ipc::feather::TableReader> table_reader_;
> ~~~~~~~~~~~~~~^1 error generated.Error in compile (line
> 33)mex(fullfile(vars.srcDir, "featherreadmex.cc"), ...{code}
> I tried this in MATLAB R2020a and R2021a. I'm not familiar with C++ so I
> don't know how to resolve the error.
>
> !chrome-extension://pccckmaobkjjboncdfnnofkonhgpceea/images/loading.gif!
--
This message was sent by Atlassian Jira
(v8.3.4#803005)
