[
https://issues.apache.org/jira/browse/ARROW-16748?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]
Jed Phillips updated ARROW-16748:
---------------------------------
Description:
I am trying to install R arrow on a university cluster that's running CentOS v
7.9.2009. I've tried all of the options on [https://arrow.apache.org/docs/r/,]
but continually get the same cryptic error:
[ 34%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/c/bridge.cc.o
In file included from
/tmp/RtmpIAcCpl/R.INSTALL352b6de22db6/arrow/tools/cpp/src/arrow/c/bridge.cc:42:0:
/tmp/RtmpIAcCpl/R.INSTALL352b6de22db6/arrow/tools/cpp/src/arrow/util/small_vector.h:
In member function ‘void arrow::internal::StaticVectorStorage<T, N,
D>::move_construct(arrow::internal::StaticVectorStorage<T, N, D>&&)’:
/tmp/RtmpIAcCpl/R.INSTALL352b6de22db6/arrow/tools/cpp/src/arrow/util/small_vector.h:98:44:
error: invalid use of qualified-name ‘::move_construct_several’
storage_type::move_construct_several(other.static_data_, static_data_,
size_, N);
^
/tmp/RtmpIAcCpl/R.INSTALL352b6de22db6/arrow/tools/cpp/src/arrow/util/small_vector.h:
In member function ‘void arrow::internal::StaticVectorStorage<T, N,
D>::clear()’:
/tmp/RtmpIAcCpl/R.INSTALL352b6de22db6/arrow/tools/cpp/src/arrow/util/small_vector.h:109:35:
error: invalid use of qualified-name ‘::destroy_several’
storage_type::destroy_several(static_data_, size_);
^
make[2]: *** [src/arrow/CMakeFiles/arrow_objlib.dir/c/bridge.cc.o] Error 1
make[2]: *** Waiting for unfinished jobs....
make[1]: *** [src/arrow/CMakeFiles/arrow_objlib.dir/all] Error 2
gmake: *** [all] Error 2
**** Error building Arrow C++.
------------------------- NOTE ---------------------------
There was an issue preparing the Arrow C++ libraries.
See https://arrow.apache.org/docs/r/articles/install.html
---------------------------------------------------------
ERROR: configuration failed for package ‘arrow’}}
Here's the gcc/g++ backend that's loaded
[jm@login-17 r]$ /cluster/apps/gcc/5.2.0/bin/g++ --version
g++ (GCC) 5.2.0
[jm@login-17 r]$ /cluster/apps/gcc/5.2.0/bin/gcc --version
gcc (GCC) 5.2.0
I've also tried with gcc/g++ v 6.3.0, with the same error. And get this
regardless of whether I try to build from source, install from specific repos,
or fix the known issues for CentOS.
Any thoughts on what the problem is?
was:
I am trying to install R arrow on a university cluster that's running CentOS v
7.9.2009. I've tried all of the options on [https://arrow.apache.org/docs/r/,]
but continually get the same cryptic error:
{{[ 34%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/c/bridge.cc.o
In file included from
/tmp/RtmpIAcCpl/R.INSTALL352b6de22db6/arrow/tools/cpp/src/arrow/c/bridge.cc:42:0:
/tmp/RtmpIAcCpl/R.INSTALL352b6de22db6/arrow/tools/cpp/src/arrow/util/small_vector.h:
In member function ‘void arrow::internal::StaticVectorStorage<T, N,
D>::move_construct(arrow::internal::StaticVectorStorage<T, N, D>&&)’:
/tmp/RtmpIAcCpl/R.INSTALL352b6de22db6/arrow/tools/cpp/src/arrow/util/small_vector.h:98:44:
error: invalid use of qualified-name ‘::move_construct_several’
storage_type::move_construct_several(other.static_data_, static_data_,
size_, N);
^
/tmp/RtmpIAcCpl/R.INSTALL352b6de22db6/arrow/tools/cpp/src/arrow/util/small_vector.h:
In member function ‘void arrow::internal::StaticVectorStorage<T, N,
D>::clear()’:
/tmp/RtmpIAcCpl/R.INSTALL352b6de22db6/arrow/tools/cpp/src/arrow/util/small_vector.h:109:35:
error: invalid use of qualified-name ‘::destroy_several’
storage_type::destroy_several(static_data_, size_);
^
make[2]: *** [src/arrow/CMakeFiles/arrow_objlib.dir/c/bridge.cc.o] Error 1
make[2]: *** Waiting for unfinished jobs....
make[1]: *** [src/arrow/CMakeFiles/arrow_objlib.dir/all] Error 2
gmake: *** [all] Error 2
**** Error building Arrow C++.
------------------------- NOTE ---------------------------
There was an issue preparing the Arrow C++ libraries.
See https://arrow.apache.org/docs/r/articles/install.html
---------------------------------------------------------
ERROR: configuration failed for package ‘arrow’}}
Here's the gcc/g++ backend that's loaded
{{```}}
[jm@login-17 r]$ /cluster/apps/gcc/5.2.0/bin/g++ --version
g++ (GCC) 5.2.0
[jm@login-17 r]$ /cluster/apps/gcc/5.2.0/bin/gcc --version
gcc (GCC) 5.2.0
{{```}}
I've also tried with gcc/g++ v 6.3.0, with the same error. And get this
regardless of whether I try to build from source, install from specific repos,
or fix the known issues for CentOS.
Any thoughts on what the problem is?
> CRAN Installation error on CentOS cluster
> ------------------------------------------
>
> Key: ARROW-16748
> URL: https://issues.apache.org/jira/browse/ARROW-16748
> Project: Apache Arrow
> Issue Type: Bug
> Environment: CentOS 7.9.2009
> Reporter: Jed Phillips
> Priority: Major
>
> I am trying to install R arrow on a university cluster that's running CentOS
> v 7.9.2009. I've tried all of the options on
> [https://arrow.apache.org/docs/r/,] but continually get the same cryptic
> error:
>
> [ 34%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/c/bridge.cc.o
> In file included from
> /tmp/RtmpIAcCpl/R.INSTALL352b6de22db6/arrow/tools/cpp/src/arrow/c/bridge.cc:42:0:
> /tmp/RtmpIAcCpl/R.INSTALL352b6de22db6/arrow/tools/cpp/src/arrow/util/small_vector.h:
> In member function ‘void arrow::internal::StaticVectorStorage<T, N,
> D>::move_construct(arrow::internal::StaticVectorStorage<T, N, D>&&)’:
> /tmp/RtmpIAcCpl/R.INSTALL352b6de22db6/arrow/tools/cpp/src/arrow/util/small_vector.h:98:44:
> error: invalid use of qualified-name ‘::move_construct_several’
> storage_type::move_construct_several(other.static_data_, static_data_,
> size_, N);
> ^
> /tmp/RtmpIAcCpl/R.INSTALL352b6de22db6/arrow/tools/cpp/src/arrow/util/small_vector.h:
> In member function ‘void arrow::internal::StaticVectorStorage<T, N,
> D>::clear()’:
> /tmp/RtmpIAcCpl/R.INSTALL352b6de22db6/arrow/tools/cpp/src/arrow/util/small_vector.h:109:35:
> error: invalid use of qualified-name ‘::destroy_several’
> storage_type::destroy_several(static_data_, size_);
> ^
> make[2]: *** [src/arrow/CMakeFiles/arrow_objlib.dir/c/bridge.cc.o] Error 1
> make[2]: *** Waiting for unfinished jobs....
> make[1]: *** [src/arrow/CMakeFiles/arrow_objlib.dir/all] Error 2
> gmake: *** [all] Error 2
> **** Error building Arrow C++.
> ------------------------- NOTE ---------------------------
> There was an issue preparing the Arrow C++ libraries.
> See https://arrow.apache.org/docs/r/articles/install.html
> ---------------------------------------------------------
> ERROR: configuration failed for package ‘arrow’}}
> Here's the gcc/g++ backend that's loaded
> [jm@login-17 r]$ /cluster/apps/gcc/5.2.0/bin/g++ --version
> g++ (GCC) 5.2.0
> [jm@login-17 r]$ /cluster/apps/gcc/5.2.0/bin/gcc --version
> gcc (GCC) 5.2.0
> I've also tried with gcc/g++ v 6.3.0, with the same error. And get this
> regardless of whether I try to build from source, install from specific
> repos, or fix the known issues for CentOS.
>
> Any thoughts on what the problem is?
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