Bugs item #1016197, was opened at 2004-08-25 14:46
Message generated for change (Comment added) made by migueljmol
You can respond by visiting: 
https://sourceforge.net/tracker/?func=detail&atid=379133&aid=1016197&group_id=23629

Category: None
Group: None
>Status: Closed
>Resolution: Fixed
Priority: 5
Submitted By: Miguel (migueljmol)
Assigned to: Miguel (migueljmol)
Summary: pdb header performance problem

Initial Comment:
When opening a PDB file we save the header for emartz. 

However, it seems that there may be a significant
performance problem when working with large molecules.
I suspect that all the string garbage is causing problems. 

1. see about using a StringBuffer
2. see about deferring the header stuff unless/until it
is explicitly called for


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>Comment By: Miguel (migueljmol)
Date: 2004-12-13 11:38

Message:
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Resolved. 

Model header is reread iff needed. 


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Comment By: Miguel (migueljmol)
Date: 2004-09-17 12:24

Message:
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I switched this to a StringBuffer. 
I am sure that this helped. 
But the right thing to do is get rid of the entire thing.
Then provide functions for retrieving the current file so
that it can be displayed. 


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You can respond by visiting: 
https://sourceforge.net/tracker/?func=detail&atid=379133&aid=1016197&group_id=23629


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