From: "Miguel" <[EMAIL PROTECTED]> >From the stack dump it looks like to me that the Jmol code is trying to >determine whether or not the atoms are part of an amino acid. > >It is not clear to me why this is happening. It normally occurs only for >..pdb and .mmcif files.
Hi Miguel, I don't really know either, but I find something strange : - In Frame.java, currentGroupSequenceNumber is not explicitly initialized, so it is equals to 0 at the beginning - In Atom.java, sequenceNumber is explicitely initialized to Integer.MIN_VALUE. So, in Frame.addAtom(), startGroup() is always called if Atom.sequenceNumber has not been initialized. Nicolas ------------------------------------------------------- This SF.Net email is sponsored by: NEC IT Guy Games. Get your fingers limbered up and give it your best shot. 4 great events, 4 opportunities to win big! Highest score wins.NEC IT Guy Games. Play to win an NEC 61 plasma display. Visit http://www.necitguy.com/?r=20 _______________________________________________ Jmol-developers mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-developers
