Angel, There problem was with the torsional calculation. I've uploaded a modified jar files. -- see
http://chemapps.stolaf.edu/jmol/docs/examples-11/new.htm That thyroxine.cml minimizes just fine now. Developers, I had some very strange cross-SVN branch thing going on there. A few files in my checked out Trunk turned out to be in my branch, so I was committing changes to a branch and a trunk at the same time. I didn't know that was possible. I've deleted the files and restored them and checked them in again, and now it looks ok. Prior to this, though, I think if you checked out the trunk you would not find the minimizer -- I suspect that's the problem with 11.5.21; Nico, please release 11.5.22, which should fix this problem. Those are in http://chemapps.stolaf.edu/jmol/docs/examples-11/ Bob -- Robert M. Hanson Professor of Chemistry St. Olaf College Northfield, MN http://www.stolaf.edu/people/hansonr If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 ------------------------------------------------------------------------- Check out the new SourceForge.net Marketplace. It's the best place to buy or sell services for just about anything Open Source. http://ad.doubleclick.net/clk;164216239;13503038;w?http://sf.net/marketplace _______________________________________________ Jmol-developers mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-developers
