Hi Bob,
One of the test for the smiles matcher (Chapter7_17) provoke an error :
org.jmol.smiles.InvalidSmilesException: Invalid stereochemistry descriptor
at org.jmol.smiles.SmilesParser.checkChirality(SmilesParser.java:817)
at org.jmol.smiles.SmilesParser.parseAtom(SmilesParser.java:540)
at org.jmol.smiles.SmilesParser.parseSmiles(SmilesParser.java:337)
at org.jmol.smiles.SmilesParser.parse(SmilesParser.java:147)
at org.jmol.smiles.SmilesParser.getMolecule(SmilesParser.java:119)
at
org.jmol.smiles.SmilesMatcher.getSubstructureSetArray(SmilesMatcher.java:286)
at org.jmol.smiles.SmilesMatcher.find(SmilesMatcher.java:230)
at org.jmol.smiles.SmilesMatcher.areEqual(SmilesMatcher.java:85)
at
org.jmol.smiles.TestSmilesParser.checkMolecule(TestSmilesParser.java:1258)
at
org.jmol.smiles.TestSmilesParser.testChapter7_17(TestSmilesParser.java:1169)
org.jmol.smiles.InvalidSmilesException: Invalid stereochemistry descriptor
at org.jmol.smiles.SmilesParser.checkChirality(SmilesParser.java:817)
at org.jmol.smiles.SmilesParser.parseAtom(SmilesParser.java:540)
at org.jmol.smiles.SmilesParser.parseSmiles(SmilesParser.java:337)
at org.jmol.smiles.SmilesParser.parse(SmilesParser.java:147)
at org.jmol.smiles.SmilesParser.getMolecule(SmilesParser.java:119)
at
org.jmol.smiles.SmilesMatcher.getSubstructureSetArray(SmilesMatcher.java:286)
at org.jmol.smiles.SmilesMatcher.find(SmilesMatcher.java:230)
at org.jmol.smiles.SmilesMatcher.areEqual(SmilesMatcher.java:85)
at
org.jmol.smiles.TestSmilesParser.checkMolecule(TestSmilesParser.java:1258)
at
org.jmol.smiles.TestSmilesParser.testChapter7_17(TestSmilesParser.java:1169)
java.lang.NullPointerException
at org.jmol.smiles.SmilesMatcher.areEqual(SmilesMatcher.java:85)
at
org.jmol.smiles.TestSmilesParser.checkMolecule(TestSmilesParser.java:1258)
at
org.jmol.smiles.TestSmilesParser.testChapter7_17(TestSmilesParser.java:1169)
Nico
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