Hello!

I would like to propose a completely standalone jQuery plugin for Jmol. 
I searched the web and found only one solution that works as a wrapper 
for Jmol.js, so I took my time and wrote this alpha version, which does 
not use Jmol.js at all. I've hosted it on GitHub: 
https://github.com/gusc/jMol

A brief history. My father is a Ph.D in bio chemistry, and he's still 
using Chime plugins for old Firefox (well he even used to use Netscape 
some 2 years ago), but the times are changing, and it's getting harder 
for him to show his students how to get that old software running on new 
PCs or even Macs. So I set up to help him out. Being a web developer for 
almost 10 years now and also having a masters degree in physical 
chemistry, although after graduation my work has mostly been 
concentrated on software and web development, there's still a small part 
of me that's been fascinated about the work on Jmol. First of all it's 
cross platform, with all the scripting possibilities and it's kind of 
easy to use in a web environment.

And so there was this "kind of easy to use" part in me, that made me 
create this jQuery plugin, because you know, it's a professional 
cretinism thing. :) It's a new era in web development (for about 6 years 
now), and it was really like, throwing me back a few years, when I found 
out that I have to use inline scripting. But don't get offended guys, 
you've done great job, so that's why I would love to share with you this 
prototype of jMol (mind the small j :)) which could be a complete 
replacement of Jmol.js.

I've currently tested it on (and it works with some small quirks):
Google Chrome on Windows - works
Firefox 12.0 on Windows - works
Firefox 13.0.1 on Windows - started up, but displayed status message 
"Jmol script terminated"
Internet Explorer 8.0 - works
Safari 5.1.7 on Mac - works
Safari 5.1.4 on Windows - could not load Java at all (as in plug-in not 
found)
Opera 11.61 on Windows - started up, but could not execute scripts as a 
script method was not found on an object (might be something with a HTML 
object tag formatting on Opera)

And if we are still on a subject, where can I find some documentation on 
external methods, that can be accessed through JavaScript? I've looked 
though Jmol site for 2 days straight, but it's all about scripting 
options and Jmol.js, except for a applet.script() method. I looked in to 
SVN, but all I could find was this undocumented applet source (which as 
much as I understood is the front-end of an applet, isn't it?): 
http://jmol.svn.sourceforge.net/viewvc/jmol/trunk/Jmol/src/JmolApplet.java?revision=16759&view=markup

Sincerely Yours,
Gusts Kaksis
http://gusc.lv/

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