Hi again,
Thank you for your anwsers, both of you.
For now, I'm just making some research on the morphing because I've to study
that for my degree. That's why I was interested in Jmol.
But after that, why not.
Regards,
Neal.
Date: Wed, 17 Apr 2013 15:46:08 -0500
From: hans...@stolaf.edu
To: jmol-developers@lists.sourceforge.net
Subject: Re: [Jmol-developers] Morphing
That said, we do now have the following, which is largely untested:
JmolVersion="13.1.13"
new feature: animation MORPH n
- where n is a number of frames to be inserted between trajectories
- requires previous LOAD TRAJECTORY
or the loading of a PyMOL PSE file having a movie (automatically a
trajectory)
- Jmol will do a linear morph as the animation runs.
- for example:
load test.pse
animation morph 3
- could be used for a linear morph between just two structures:
load trajectory "test1.pdb" "test2.pdb"
animation morph 32 // animation will run 33 frames
Neal, are you saying you want to contribute to Jmol in the area of morphing?
I'd like to hear more if that's what you are suggesting.
Bob Hanson
On Wed, Apr 17, 2013 at 9:14 AM, Angel Herráez <angel.herr...@uah.es> wrote:
Hello Neal, welcome
> 1) For the morphing/animation, do you use some models from the same
> protein and just show and hide them to make an animation ?
Yes, Jmol just displays in sequence whatever set of models is loaded
into it. You can control speed, direction, repetition and range of
models displayed.
> 2) Do you use MorphServer or something like that to create your
> animation ?
> How your morphing method works ?
Ther is no morphing inside Jmol. You may get models that you have
prepared using MorphServer, but Jmol bears no relation with that.
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Robert M. Hanson
Larson-Anderson Professor of Chemistry
Chair, Chemistry Department
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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