no such script exists that I know of, but you can certainly write one
yourself -- atoms can be moved, measurements can be made...
On Tue, Sep 17, 2013 at 4:26 AM, scamiolo <s.cami...@uniss.it> wrote:
>
> Hi there,
> I am preparing some video for teaching organic reaction mechanisms. I need
> to transform a sp3 hybridized carbon to sp2 hybridization. In facts a
> carbon
> atom is bound to 4 different groups with bond angles which are around 109°.
> One of the substituents leaves the molecule and the carbon it was attached
> to then became planar and all the remaining substituents goes co-planar and
> with angles of 120° between each other. What I would like to know is
> whether
> there is a script command which I can use to change the bond angles but in
> a
> way that all the atoms and groups attached to the substituents which change
> the angles will follow the residue they are attached to (hope it is clear)
> Thank you so much for the help you are going to provide me
>
> regards
> --
> View this message in context:
> http://old.nabble.com/Changing-bond-angle-tp35944848p35944848.html
> Sent from the jmol-developers mailing list archive at Nabble.com.
>
>
>
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--
Robert M. Hanson
Larson-Anderson Professor of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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