Search the src code for references to JmolBioResolver. There should be none.
delete the directories
bin
build/classes
build/applet-classes
and recompile.
On Fri, May 27, 2016 at 8:05 AM, Kanters, Rene <rkant...@richmond.edu>
wrote:
> Bob,
>
> I did clean builds several times to no avail. I am building the Jmol.jar
> using an ant builder setup for the Properties of Jmol, where I specify it
> to use Jmol/build.xml buildfile. I think that when I run it directly in
> Eclipse is may use the Java Builder set up, but that one is not editable,
> so I can't tell what exactly that does.
>
> I also did an 'override and update' to make sure that I pulled everything
> back as it is on the SVN server. The only files I did not allow to
> overwrite were the .externalToolBuilders/Jmol.jar.launch (which does not
> seem to have a version in SVN, probably something new in Mars.2),
> Settings/org.eclipse.jdt.core.pref and .project. (like I had before).
>
> I do indeed not see the org/jmol/api/JmolBioResolver (and am somewhat
> surprised it isn't echoed as org.jmol.apl), so why is there a script that
> still seems to know about that and only needs it when I am running the
> Jmol.jar (using java -jar Jmol.jar) but not when I am running it from
> within eclipse?
>
> René
>
> On May 27, 2016, at 1:44 AM, Robert Hanson <hans...@stolaf.edu> wrote:
>
> JmolBioResolver was decommissioned. Perhaps you have not fully
> synchronized. Try a clean build.
>
> I have also added those to the release branch, 14.6.
>
> On Thu, May 26, 2016 at 4:04 PM, Kanters, Rene <rkant...@richmond.edu>
> wrote:
>
>> Hi,
>>
>> I just synchronized after having made the changes in the qchem reader
>> this morning, and now find that the application when running in the Eclipse
>> Mars.2 (Release 4.5.2) run the app fine, but that the Jmol.jar I am
>> creating gives an error message when I try to measure things using the
>> console:
>>
>> $ measure (c2)(c6)
>> script ERROR: java.lang.NoSuchMethodError:
>> org.jmol.viewer.Viewer.getJBR()Lorg/jmol/api/JmolBioResolver;
>>
>> Does anybody have any idea why that started happening?
>>
>> René
>>
>>
>>
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>
>
> --
> Robert M. Hanson
> Larson-Anderson Professor of Chemistry
> St. Olaf College
> Northfield, MN
> http://www.stolaf.edu/people/hansonr
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
>
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> _______________________________________________
> Jmol-developers mailing list
> Jmol-developers@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/jmol-developers
>
>
--
Robert M. Hanson
Larson-Anderson Professor of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
------------------------------------------------------------------------------
What NetFlow Analyzer can do for you? Monitors network bandwidth and traffic
patterns at an interface-level. Reveals which users, apps, and protocols are
consuming the most bandwidth. Provides multi-vendor support for NetFlow,
J-Flow, sFlow and other flows. Make informed decisions using capacity
planning reports. https://ad.doubleclick.net/ddm/clk/305295220;132659582;e
_______________________________________________
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