Gerzon wrote: > 1. In Chime - If I select a pair of atoms and run 'monitor', I get the > line between these two atoms and distance. - The same in Jmol
Correct. monitor 1 2 Will draw a dotted line and measure the distance between atom numbers 1 and 2. In addition, Jmol supports the following monitor 1 2 3 monitor 1 2 3 4 These commands will measure the angle or the torsion angle defined by the 3 or 4 atoms. > 2. In Chime - If I than select a next pair of atoms and run 'monitor', > I get line between these two new atoms and distance. The previos > line and distance still on the screen. - The same in Jmol. Correct. If you run the same command again then it turns off the monitor > 3. In chime - I cann to remove all previous lines and distances. > with command 'monitor off'. This was a bug. monitor off will now turn off all monitors. > How remove the lines and distances in Jmol?. > ( all previous lines and distances or one previous line and distance) This now operates correctly in Jmol. The code is checked into CVS and will be released with 10pre7 ... within the next week or two. Note that some of this behavior may change in the near future. It seems that many people want to use 'monitor' to create artificial bonds. The combination of 'monitor 1 2' and 'set monitor off'. This is incompatible with the Jmol design. For example, measurements are drawn 'above' the atoms so that they will remain visible, even if the atoms are at 100% spacefill. Therefore, I am probably going to implement a new command in Jmol called 'measure'. Then 'monitor' can do whatever is necessary for RasMol/Chime compatibility, and 'measure' can be used for measurements. Miguel ------------------------------------------------------- This SF.Net email is sponsored by: IBM Linux Tutorials Free Linux tutorial presented by Daniel Robbins, President and CEO of GenToo technologies. Learn everything from fundamentals to system administration.http://ads.osdn.com/?ad_id=1470&alloc_id=3638&op=click _______________________________________________ Jmol-users mailing list [EMAIL PROTECTED] https://lists.sourceforge.net/lists/listinfo/jmol-users
